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IMGVR_UViG_3300024270_004654-3300024270-Ga0257091_100830508
Arc-VirIMGVR_UViG_3300024270_004654-3300024270-Ga0257091_100830508
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-64
Domain cluster:
rep: KU935715.1__AND75446.1__ME3_285__00285__D2-62
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n4fA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 36.0 | 4.31e-01 | 93.7% | 87.5% |
| 3purA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 39.0 | 3.74e-01 | 100.0% | 55.4% |
| 4aybP00 | 2.20.28.30 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase ii, chain L | 0.57 | 29.0 | 3.33e-01 | 93.7% | 61.4% |
| 3vz3A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 39.0 | 2.64e-01 | 81.0% | 45.6% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 40.0 | 2.70e-01 | 84.1% | 45.1% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.52 | 37.0 | 3.42e-01 | 100.0% | 58.0% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.52 | 42.0 | 2.60e-01 | 100.0% | 72.6% |
| 3euoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 36.0 | 2.87e-01 | 79.4% | 72.0% |
| 2a73B01 | 1.20.91.20 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Anaphylotoxins (complement system) | 0.50 | 35.0 | 3.47e-01 | 81.0% | 68.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3277720 | 375.1.1.185 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_8 | 0.70 | 37.0 | 4.32e-01 | 93.7% | 77.5% |
| 4990345 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 38.0 | 4.18e-01 | 93.7% | 68.0% |
| 4964333 | 375.1.1.339 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7560 | 0.64 | 35.0 | 4.14e-01 | 95.2% | 82.5% |
| 5032187 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 43.0 | 4.52e-01 | 95.2% | 80.0% |
| 5068907 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 34.0 | 3.94e-01 | 93.7% | 73.3% |
| 4031664 | 375.1.1.75 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2197 | 0.63 | 39.0 | 4.75e-01 | 95.2% | 100.0% |
| 3963491 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 35.0 | 4.08e-01 | 95.2% | 85.0% |
| 4991835 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 39.0 | 4.30e-01 | 93.7% | 84.0% |
| 3425436 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 38.0 | 4.49e-01 | 98.4% | 100.0% |
| 4629411 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.57 | 30.0 | 3.70e-01 | 84.1% | 88.6% |
| 3352699 | 375.1.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rubredoxin | 0.56 | 31.0 | 3.41e-01 | 95.2% | 66.0% |
| 4019883 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 40.0 | 2.73e-01 | 82.5% | 95.3% |
| 4980605 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 33.0 | 3.81e-01 | 82.5% | 86.7% |
| 3281348 | 4221.1.1.0 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like | 0.54 | 37.0 | 3.26e-01 | 88.9% | 45.0% |
| 5058160 | 239.1.1.2 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_S6e | 0.54 | 44.0 | 3.68e-01 | 93.7% | 97.5% |
| 3614660 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.52 | 42.0 | 2.80e-01 | 90.5% | 49.3% |
| 4583179 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 37.0 | 3.96e-01 | 93.7% | 89.1% |
| 3824883 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.51 | 40.0 | 3.77e-01 | 93.7% | 91.8% |