←Back to structures
IMGVR_UViG_3300024327_000729-3300024327-Ga0233434_10115963
Arc-VirIMGVR_UViG_3300024327_000729-3300024327-Ga0233434_10115963
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-63
D2
medium
residues 64-155_356-397
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.94 | 91.0 | 5.84e-01 | 100.0% | 60.3% |
| 6vxcA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.77 | 72.0 | 4.36e-01 | 100.0% | 51.8% |
| 5ymrC00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.77 | 72.0 | 4.34e-01 | 100.0% | 51.8% |
| 2y8nA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.75 | 70.0 | 4.17e-01 | 100.0% | 51.8% |
| 2ph7A02 | 3.40.50.10670 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain | 0.63 | 35.0 | 4.07e-01 | 95.5% | 76.0% |
| 4lgvA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 38.0 | 3.41e-01 | 93.3% | 45.5% |
| 1dtnA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 39.0 | 3.26e-01 | 72.4% | 56.5% |
| 2qtlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.53 | 36.0 | 3.50e-01 | 70.1% | 79.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3275621 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.98 | 96.0 | 6.30e-01 | 100.0% | 74.9% |
| 5051775 | 2500.1.1.9 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › RNR-II_ins_dom | 0.95 | 93.0 | 5.99e-01 | 100.0% | 67.3% |
| 4208725 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.94 | 91.0 | 5.87e-01 | 100.0% | 66.6% |
| 4087732 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.94 | 91.0 | 5.88e-01 | 100.0% | 73.3% |
| 3949156 | 2500.1.1.7 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Gly_radical, NRDD | 0.75 | 70.0 | 4.45e-01 | 100.0% | 60.7% |
| 3978395 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.75 | 70.0 | 4.44e-01 | 100.0% | 60.7% |
| 1165402 | 2006.1.3.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim,TOPRIM_C | 0.64 | 31.0 | 3.03e-01 | 100.0% | 41.0% |
| 3213943 | 2007.5.1.23 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH | 0.56 | 40.0 | 3.28e-01 | 73.9% | 79.9% |
| 3243089 | 2007.5.1.23 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH | 0.54 | 39.0 | 3.12e-01 | 73.9% | 77.8% |
| 3925174 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.50 | 35.0 | 2.88e-01 | 71.6% | 73.3% |
D3
medium
residues 156-285_329-355
D4
medium
residues 286-328_398-458
Domain cluster:
rep: IMGVR_UViG_3300002514_003122-3300002514-JGI25133J35611_100073852__D475-542_610-654
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l1lA03 | 3.90.1390.10 | Alpha Beta › Alpha-Beta Complex › b-12 dependent (class ii) ribonucleotide reductase, chain A, domain 3 › b-12 dependent (class ii) ribonucleotide reductase, chain A, domain 3 | 0.89 | 63.0 | 6.63e-01 | 72.1% | 94.7% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.82e-01 | 95.2% | 100.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4087732 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.77 | 66.0 | 4.09e-01 | 88.5% | 30.9% |
| 5008116 | 304.24.1.39 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 | 0.54 | 36.0 | 3.75e-01 | 93.3% | 73.7% |
| 5010365 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.54 | 31.0 | 3.70e-01 | 95.2% | 84.3% |
| 3752343 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.54 | 30.0 | 3.72e-01 | 74.0% | 98.2% |
| 5012877 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.51 | 29.0 | 3.32e-01 | 75.0% | 76.0% |
| 3625797 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 35.0 | 3.87e-01 | 82.7% | 92.5% |
| 3928953 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 27.0 | 3.33e-01 | 73.1% | 90.9% |
| 3632622 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.51 | 35.0 | 3.49e-01 | 72.1% | 75.5% |
| 3186329 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.50 | 34.0 | 3.25e-01 | 70.2% | 59.2% |