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IMGVR_UViG_3300024327_000848-3300024327-Ga0233434_10037892
Arc-VirIMGVR_UViG_3300024327_000848-3300024327-Ga0233434_10037892
Identity
- Kingdom:
- archaea
Quality
90.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-58
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80
D2
high
residues 73-123
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zxiA04 | 1.10.150.570 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GidA associated domain, C-terminal subdomain | 0.62 | 42.0 | 4.18e-01 | 92.2% | 69.8% |
| 4bgdA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.69e-01 | 94.1% | 91.1% |
| 2mh2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 4.09e-01 | 100.0% | 96.9% |
| 1fadA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.53 | 39.0 | 3.28e-01 | 82.4% | 47.4% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.52 | 42.0 | 4.03e-01 | 98.0% | 82.8% |
| 3me5A01 | 1.10.260.140 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.51 | 37.0 | 3.49e-01 | 80.4% | 64.1% |
| 5jolA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.50 | 38.0 | 3.43e-01 | 92.2% | 86.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3809113 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.56 | 44.0 | 3.73e-01 | 94.1% | 86.3% |
| 4012282 | 101.1.1.46 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_2 | 0.55 | 44.0 | 4.16e-01 | 98.0% | 87.7% |
| 3760172 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 40.0 | 3.61e-01 | 94.1% | 65.0% |
D3
medium
residues 133-188
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80
D4
medium
residues 197-239
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80