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IMGVR_UViG_3300024327_000848-3300024327-Ga0233434_10037895
Arc-VirIMGVR_UViG_3300024327_000848-3300024327-Ga0233434_10037895
Identity
- Kingdom:
- archaea
Quality
87.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-59
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80
D2
high
residues 195-253
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80
D3
high
residues 260-318
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80
D4
high
residues 320-368
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80
D5
medium
residues 74-124
Domain cluster:
rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00276__D9-58
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gpkF02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 39.0 | 2.59e-01 | 70.6% | 50.4% |
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.55 | 39.0 | 3.60e-01 | 98.0% | 56.7% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.54 | 39.0 | 3.85e-01 | 98.0% | 73.2% |
| 6za2B01 | 3.40.50.10390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1 | 0.51 | 42.0 | 3.05e-01 | 96.1% | 66.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3705215 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.60 | 50.0 | 4.74e-01 | 100.0% | 89.2% |
| 3251818 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.57 | 40.0 | 3.78e-01 | 82.4% | 60.0% |
| 3838782 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.54 | 39.0 | 3.73e-01 | 100.0% | 64.6% |
| 4440612 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.54 | 39.0 | 3.70e-01 | 100.0% | 64.6% |
| 4541046 | 4018.1.1.1 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase | 0.51 | 35.0 | 2.47e-01 | 70.6% | 44.6% |
| 5073938 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.50 | 40.0 | 3.57e-01 | 100.0% | 75.3% |
D6
medium
residues 134-191
Domain cluster:
rep: FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00227__D32-80