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IMGVR_UViG_3300024327_000848-3300024327-Ga0233434_10037898

Arc-Vir

IMGVR_UViG_3300024327_000848-3300024327-Ga0233434_10037898

Quality

87.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-118
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 52.0 6.38e-01 74.5% 100.0%
1w5sA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.81e-01 90.9% 100.0%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 48.0 5.87e-01 72.7% 100.0%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 50.0 5.74e-01 83.6% 90.2%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 6.64e-01 94.5% 100.0%
1fokA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 54.0 5.97e-01 86.4% 96.6%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 5.66e-01 72.7% 91.8%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.77e-01 85.5% 59.7%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.47e-01 85.5% 85.3%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 4.43e-01 85.5% 51.7%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 49.0 5.64e-01 74.5% 95.2%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 4.71e-01 87.3% 56.2%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 47.0 5.16e-01 80.0% 83.3%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 5.53e-01 75.5% 97.7%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 4.80e-01 84.5% 63.2%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 48.0 5.60e-01 80.0% 100.0%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 46.0 5.35e-01 75.5% 96.2%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 5.76e-01 87.3% 91.4%
3jw4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 45.0 4.32e-01 82.7% 59.8%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.67 52.0 4.04e-01 80.0% 48.2%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 5.00e-01 90.9% 69.7%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 5.66e-01 86.4% 95.9%
2a07J00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 5.12e-01 70.9% 92.8%
2ly1A03 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.66 44.0 4.99e-01 70.9% 91.4%
2rkhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 5.48e-01 89.1% 100.0%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 5.63e-01 80.9% 100.0%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.66 47.0 5.39e-01 77.3% 100.0%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 5.42e-01 81.8% 95.7%
6do0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 5.07e-01 78.2% 85.0%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 5.36e-01 86.4% 92.5%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 5.40e-01 86.4% 96.1%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 5.24e-01 77.3% 97.7%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 49.0 5.10e-01 80.9% 89.2%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.62 43.0 4.66e-01 71.8% 97.9%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 5.05e-01 75.5% 100.0%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.85e-01 80.0% 100.0%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.60 42.0 3.91e-01 72.7% 57.2%
3x1oA00 1.20.120.1790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.60 47.0 4.25e-01 82.7% 74.5%
2lh9A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.60 40.0 4.66e-01 74.5% 97.4%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.60 53.0 4.75e-01 98.2% 69.9%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 4.59e-01 72.7% 93.0%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.70e-01 80.0% 100.0%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.43e-01 77.3% 84.2%
5ljmA00 1.20.58.2190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 49.0 4.08e-01 96.4% 58.1%
5hmpB02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 32.0 4.05e-01 70.0% 95.3%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.56 50.0 4.52e-01 100.0% 78.9%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 35.0 3.81e-01 86.4% 75.5%
2ccqA00 1.20.58.2190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 44.0 4.61e-01 90.9% 98.0%
6ui4A03 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.54 38.0 4.18e-01 73.6% 96.5%
4f0zB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 35.0 3.18e-01 89.1% 47.7%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.50 37.0 3.59e-01 100.0% 67.2%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4968340 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 57.0 6.25e-01 76.4% 100.0%
3398923 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.77 50.0 5.88e-01 70.9% 91.3%
4631918 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 50.0 5.96e-01 71.8% 97.3%
3958566 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.76 50.0 5.51e-01 70.9% 82.2%
5035389 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 56.0 6.34e-01 85.5% 100.0%
4964386 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 5.69e-01 73.6% 83.2%
3390907 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 54.0 6.12e-01 80.0% 96.4%
5076211 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 5.18e-01 70.9% 75.5%
5035276 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 57.0 6.28e-01 86.4% 97.8%
4982553 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.74 65.0 6.64e-01 98.2% 99.0%
4963095 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.74 56.0 5.68e-01 89.1% 79.8%
4939871 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.73 60.0 6.21e-01 90.9% 92.4%
3398316 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.73 53.0 5.91e-01 75.5% 96.5%
4525548 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 6.32e-01 96.4% 96.0%
3393979 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.72 50.0 5.07e-01 73.6% 71.8%
4940719 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 54.0 4.85e-01 80.0% 73.2%
3278769 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 5.77e-01 77.3% 100.0%
4955128 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 54.0 4.92e-01 83.6% 61.1%
4979487 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 4.81e-01 80.0% 60.7%
5030693 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 5.97e-01 89.1% 91.4%
3552400 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.70 54.0 3.92e-01 80.9% 39.0%
4990701 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 56.0 5.33e-01 85.5% 77.7%
5035624 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.70 48.0 5.42e-01 76.4% 91.8%
5030252 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 57.0 6.00e-01 89.1% 95.0%
4955611 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 54.0 5.58e-01 80.9% 85.6%
5028122 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 53.0 5.00e-01 90.0% 67.7%
4933514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 61.0 5.58e-01 94.5% 91.4%
5022936 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 50.0 5.06e-01 75.5% 75.5%
3499387 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.69 50.0 5.06e-01 78.2% 75.5%
2137768 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.68 51.0 4.34e-01 84.5% 49.1%
2097968 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.68 49.0 5.61e-01 75.5% 100.0%
4979916 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 5.48e-01 92.7% 76.2%
5009323 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 55.0 4.89e-01 85.5% 66.9%
4978424 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 53.0 5.14e-01 80.9% 78.3%
5000704 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 49.0 5.45e-01 75.5% 92.2%
5072071 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 43.0 5.18e-01 79.1% 100.0%
5046890 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 47.0 4.37e-01 72.7% 63.6%
4973555 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 53.0 4.50e-01 82.7% 52.9%
5028427 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 51.0 5.28e-01 83.6% 83.8%
3620712 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 54.0 5.55e-01 91.8% 90.5%
3979431 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 54.0 4.86e-01 86.4% 63.3%
5031078 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 53.0 5.60e-01 86.4% 93.0%
166120 101.1.2.146 alpha arrays › HTH › HTH › winged helix domain › AphA_like 0.66 50.0 4.38e-01 89.1% 53.7%
4927049 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 51.0 5.37e-01 86.4% 90.0%
5031076 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 52.0 5.18e-01 85.5% 80.0%
4997662 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 48.0 4.82e-01 80.9% 75.5%
5000260 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 4.72e-01 87.3% 74.4%
4947503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 56.0 4.94e-01 92.7% 93.1%
2685 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 50.0 5.50e-01 81.8% 98.9%
3841412 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.65 47.0 4.69e-01 78.2% 72.2%
4943320 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 47.0 4.57e-01 78.2% 68.3%
3414623 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.65 47.0 3.41e-01 78.2% 28.1%
5053457 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 52.0 4.29e-01 86.4% 50.8%
3225058 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.64 53.0 3.75e-01 88.2% 36.0%
4990337 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 49.0 5.34e-01 86.4% 97.8%
3951258 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 52.0 4.64e-01 87.3% 64.7%
4933566 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 47.0 4.79e-01 78.2% 81.9%
5024398 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 50.0 4.76e-01 85.5% 80.8%
3588087 101.1.2.99 alpha arrays › HTH › HTH › winged helix domain › BrxA 0.62 52.0 5.06e-01 90.9% 95.0%
5011050 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 50.0 4.79e-01 86.4% 79.2%
3615532 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 41.0 4.69e-01 70.0% 100.0%
4954654 101.1.2.99 alpha arrays › HTH › HTH › winged helix domain › BrxA 0.61 50.0 4.91e-01 90.0% 95.0%
5049424 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 4.55e-01 88.2% 78.6%
3582810 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 45.0 4.94e-01 80.0% 96.7%
3343295 101.1.1.437 alpha arrays › HTH › HTH › Three-helical HTH › PheRS_DBD1, PheRS_DBD3 0.59 42.0 3.57e-01 85.5% 45.7%
3584520 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.53 42.0 4.24e-01 85.5% 85.5%
D2 high residues 121-171
PDB