Back to structures

IMGVR_UViG_3300024336_000142-3300024336-Ga0233447_100475112

Arc-Vir

IMGVR_UViG_3300024336_000142-3300024336-Ga0233447_100475112

Quality

94.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 90-135
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mehA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.84 61.0 3.57e-01 100.0% 10.2%
1zfjA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.82 65.0 3.69e-01 100.0% 8.4%
5w4tB03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.54 41.0 3.34e-01 91.3% 62.0%
2bisA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 37.0 2.40e-01 95.7% 14.2%
2h6uA00 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.52 41.0 3.29e-01 100.0% 64.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4173173 2002.1.1.23 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH 0.81 73.0 4.24e-01 100.0% 13.1%
3555073 2002.1.1.23 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH 0.81 72.0 4.22e-01 100.0% 13.4%
None 0.79 71.0 4.13e-01 100.0% 13.5%
D2 medium residues 1-81
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00478.32 best IMPDH 101.5 6.90e-29 100.0% 23.2%
PF05690.21 ThiG 27.8 2.20e-06 85.2% 21.5%