←Back to structures
IMGVR_UViG_3300024355_000328-3300024355-Ga0255157_10015804
Arc-VirIMGVR_UViG_3300024355_000328-3300024355-Ga0255157_10015804
Identity
- Kingdom:
- archaea
Quality
85.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-76
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k16A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 43.0 | 4.19e-01 | 89.9% | 88.0% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 33.0 | 3.58e-01 | 84.1% | 82.5% |
| 2ysiA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.51 | 27.0 | 3.22e-01 | 75.4% | 100.0% |
| 3le4A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.50 | 27.0 | 3.00e-01 | 73.9% | 63.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3207530 | 314.1.1.22 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › zf-TFIIIC | 0.71 | 44.0 | 4.82e-01 | 72.5% | 78.2% |
| 3475492 | 3628.1.1.1 ↗ | a+b complex topology › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit › zf-TFIIIC | 0.56 | 47.0 | 3.40e-01 | 95.7% | 98.1% |
| 5074573 | 2002.1.1.57 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D | 0.55 | 45.0 | 2.80e-01 | 89.9% | 28.9% |
| 3782386 | 3628.1.1.0 ↗ | a+b complex topology › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit | 0.55 | 46.0 | 3.36e-01 | 92.8% | 77.4% |
| 3992209 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 32.0 | 3.64e-01 | 98.6% | 86.7% |
| 3413714 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.52 | 37.0 | 2.63e-01 | 73.9% | 43.6% |
| 3576110 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.52 | 31.0 | 2.82e-01 | 94.2% | 42.1% |
| 4026161 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.50 | 35.0 | 2.88e-01 | 72.5% | 70.4% |
| 4000562 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.50 | 30.0 | 3.24e-01 | 73.9% | 70.0% |