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IMGVR_UViG_3300024561_001328-3300024561-Ga0255288_10081931

Arc-Vir

IMGVR_UViG_3300024561_001328-3300024561-Ga0255288_10081931

Identity

Kingdom:
archaea

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-60
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rw0A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.80 65.0 4.50e-01 100.0% 27.7%
7ztnA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.75 67.0 4.19e-01 100.0% 29.4%
4q9aA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.71 62.0 4.19e-01 100.0% 30.6%
4b4uA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.59 46.0 4.09e-01 100.0% 59.3%
3hhfA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 41.0 3.57e-01 100.0% 47.5%
5e3iA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.56 43.0 3.72e-01 100.0% 51.5%
4axvA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.56 46.0 3.16e-01 100.0% 31.5%
2esnA03 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 40.0 3.54e-01 100.0% 49.5%
2x7mA01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.51 41.0 3.11e-01 100.0% 68.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3962945 2007.5.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.77 66.0 4.82e-01 100.0% 36.7%
3207249 2007.5.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL 0.76 69.0 4.74e-01 100.0% 48.6%
4347428 2007.1.6.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.58 44.0 3.68e-01 100.0% 45.5%
1300170 2007.1.2.13 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 0.55 47.0 3.73e-01 100.0% 46.5%