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IMGVR_UViG_3300025014_000214-3300025014-Ga0210023_100002715
Arc-VirIMGVR_UViG_3300025014_000214-3300025014-Ga0210023_100002715
Identity
- Kingdom:
- archaea
Quality
66.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-124
D2
high
residues 220-363
Domain cluster:
rep: MT074146.1__QIG64869.1__SJC03_194__00191__D182-339
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8dpkD01 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.75 | 53.0 | 4.24e-01 | 99.3% | 38.4% |
| 3w5xA00 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.64 | 35.0 | 4.65e-01 | 83.3% | 97.5% |
| 1uwdA00 | 3.30.300.130 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Fe-S cluster assembly (FSCA) | 0.64 | 39.0 | 4.54e-01 | 86.8% | 86.3% |
| 6hcdD00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 37.0 | 3.80e-01 | 93.8% | 69.6% |
| 1j72A01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.56 | 37.0 | 4.21e-01 | 91.7% | 89.0% |
| 2y27A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.56 | 39.0 | 4.43e-01 | 95.8% | 100.0% |
| 1lqlA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.55 | 39.0 | 4.45e-01 | 86.1% | 100.0% |
| 1t0fA01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 37.0 | 3.59e-01 | 70.1% | 100.0% |
| 3c6vA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.53 | 39.0 | 3.97e-01 | 88.2% | 76.9% |
| 2rb9A01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.52 | 35.0 | 3.58e-01 | 99.3% | 67.4% |
| 4u5pA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.52 | 39.0 | 3.99e-01 | 89.6% | 80.0% |
| 4n5hX00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 47.0 | 3.65e-01 | 100.0% | 74.9% |
| 4tveA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 29.0 | 3.21e-01 | 91.0% | 65.8% |
| 2zauA01 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.51 | 33.0 | 3.52e-01 | 90.3% | 73.8% |
| 3g3sA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 35.0 | 3.71e-01 | 70.8% | 81.2% |
| 2dhmA01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.51 | 31.0 | 3.71e-01 | 83.3% | 95.6% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3620704 | 232.1.1.4 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › PAD_porph | 0.78 | 66.0 | 4.95e-01 | 100.0% | 38.8% |
| 4954681 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 31.0 | 4.14e-01 | 75.7% | 70.0% |
| 4992163 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.71 | 36.0 | 5.00e-01 | 82.6% | 100.0% |
| 5046304 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.64 | 37.0 | 3.88e-01 | 88.9% | 61.5% |
| 4975755 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.64 | 35.0 | 4.49e-01 | 84.7% | 91.8% |
| 5013854 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.61 | 42.0 | 4.81e-01 | 89.6% | 96.2% |
| 4033895 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.60 | 36.0 | 4.49e-01 | 85.4% | 100.0% |
| 3463201 | 327.10.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N-like_STI | 0.60 | 35.0 | 4.02e-01 | 87.5% | 80.0% |
| 3986529 | 327.13.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH | 0.60 | 30.0 | 3.59e-01 | 79.9% | 70.5% |
| 3933039 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.59 | 52.0 | 4.23e-01 | 95.1% | 57.4% |
| 4983079 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.59 | 41.0 | 3.37e-01 | 70.1% | 50.2% |
| 4003625 | 327.11.1.4 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › MRP-S24 | 0.58 | 36.0 | 4.39e-01 | 90.3% | 97.8% |
| 5007176 | 7523.1.1.22 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 | 0.58 | 42.0 | 4.58e-01 | 88.2% | 92.2% |
| 3439658 | 327.10.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N-like_STI | 0.58 | 32.0 | 4.11e-01 | 84.7% | 100.0% |
| 4652200 | 327.10.1.11 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DNA_pol3_a_NII | 0.58 | 34.0 | 4.22e-01 | 83.3% | 97.6% |
| 5074653 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.58 | 50.0 | 4.18e-01 | 95.1% | 59.2% |
| 5063391 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.57 | 37.0 | 3.93e-01 | 86.1% | 72.3% |
| 3419043 | 327.10.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N-like_STI | 0.56 | 34.0 | 4.14e-01 | 93.8% | 100.0% |
| 4994132 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.56 | 38.0 | 4.29e-01 | 88.9% | 93.3% |
| 5082137 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.55 | 38.0 | 4.13e-01 | 92.4% | 87.8% |
| 3438965 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 35.0 | 4.03e-01 | 93.1% | 93.0% |
| 3268696 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.53 | 42.0 | 4.34e-01 | 83.3% | 97.9% |
| 5072488 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.53 | 36.0 | 4.07e-01 | 93.1% | 94.2% |
| 3839998 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.53 | 31.0 | 3.86e-01 | 86.1% | 100.0% |
| 4310335 | 316.1.1.44 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Adenyl_cycl_N | 0.53 | 47.0 | 4.13e-01 | 97.9% | 82.7% |
| 3948892 | 316.1.1.44 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Adenyl_cycl_N | 0.53 | 47.0 | 4.04e-01 | 97.9% | 76.2% |
| None | — | 0.53 | 39.0 | 3.95e-01 | 88.9% | 76.6% | |
| 5052875 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.53 | 36.0 | 4.11e-01 | 92.4% | 97.1% |
| 4229964 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.53 | 30.0 | 3.83e-01 | 84.0% | 100.0% |
| 4969921 | 327.2.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › NTP_transf_2 | 0.53 | 38.0 | 4.28e-01 | 95.8% | 99.1% |
| 5039133 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.52 | 36.0 | 4.12e-01 | 91.7% | 98.1% |
| 1400560 | 7579.1.1.47 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BD-FAE | 0.52 | 47.0 | 3.65e-01 | 100.0% | 74.9% |