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IMGVR_UViG_3300025014_000214-3300025014-Ga0210023_10000272
Arc-VirIMGVR_UViG_3300025014_000214-3300025014-Ga0210023_10000272
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-307
Domain cluster:
rep: NC_079187.1__YP_010845268.1__QNH08_gp51__00051__D35-327
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00268.28 best | Ribonuc_red_sm | 146.3 | 1.80e-42 | 99.6% | 93.2% |
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1biqA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.98 | 96.0 | 8.75e-01 | 100.0% | 87.9% |
| 2aniA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.94 | 93.0 | 8.70e-01 | 100.0% | 88.0% |
| 1h0oA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.93 | 87.0 | 8.53e-01 | 100.0% | 90.3% |
| 2rccA01 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.93 | 86.0 | 8.84e-01 | 95.3% | 100.0% |
| 4bmoA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.93 | 89.0 | 8.72e-01 | 100.0% | 93.1% |
| 5olkB01 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.92 | 90.0 | 8.95e-01 | 100.0% | 97.8% |
| 4a5dB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.92 | 74.0 | 8.04e-01 | 98.5% | 96.1% |
| 6eboA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.91 | 85.0 | 8.07e-01 | 100.0% | 84.2% |
| 3ee4A00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.90 | 83.0 | 8.19e-01 | 95.6% | 90.7% |
| 5ux2B01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 64.0 | 7.26e-01 | 85.8% | 99.1% |
| 2oc5A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.84 | 64.0 | 7.22e-01 | 85.8% | 98.6% |
| 1mhyB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.83 | 78.0 | 6.89e-01 | 98.5% | 89.3% |
| 1rtwB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.83 | 55.0 | 6.26e-01 | 74.5% | 87.0% |
| 2incB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.81 | 74.0 | 6.97e-01 | 95.3% | 93.5% |
| 1to9A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.79 | 54.0 | 5.93e-01 | 74.1% | 82.7% |
| 3u52D00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.79 | 74.0 | 6.92e-01 | 97.8% | 91.2% |
| 3pvtA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.79 | 66.0 | 6.39e-01 | 90.5% | 78.3% |
| 3mvuA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.78 | 54.0 | 5.96e-01 | 74.1% | 85.3% |
| 3ddeB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.77 | 53.0 | 5.76e-01 | 74.1% | 81.8% |
| 3rm5B02 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.75 | 52.0 | 5.70e-01 | 74.5% | 84.8% |
| 1za0A00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.75 | 61.0 | 6.53e-01 | 97.8% | 95.5% |
| 5hyhA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.73 | 68.0 | 6.70e-01 | 97.4% | 100.0% |
| 1oq4A00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.73 | 68.0 | 6.25e-01 | 98.2% | 83.2% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.68 | 26.0 | 4.43e-01 | 77.0% | 97.1% |
| 3oqlC00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.68 | 56.0 | 5.99e-01 | 85.4% | 98.8% |
| 1o5hA00 | 1.20.120.680 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle | 0.61 | 38.0 | 4.39e-01 | 98.2% | 83.5% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 30.0 | 4.03e-01 | 82.1% | 87.2% |
| 1rj1A00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.59 | 32.0 | 4.38e-01 | 70.1% | 99.3% |
| 3ezuA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 38.0 | 4.56e-01 | 87.6% | 98.9% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 38.0 | 4.32e-01 | 70.8% | 99.5% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.54 | 38.0 | 3.59e-01 | 71.2% | 87.0% |
| 3d19B00 | 1.20.1260.120 | Mainly Alpha › Up-down Bundle › Ferritin › Protein of unknown function DUF2935 | 0.52 | 37.0 | 3.80e-01 | 71.5% | 98.5% |
| 2kbbA00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.52 | 31.0 | 3.88e-01 | 86.5% | 93.7% |
| 3dyjA02 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.51 | 26.0 | 3.48e-01 | 92.7% | 89.4% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1726039 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.98 | 97.0 | 8.82e-01 | 100.0% | 88.2% |
| 436631 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.98 | 96.0 | 8.64e-01 | 100.0% | 84.9% |
| 56518 | 150.1.2.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase | 0.98 | 96.0 | 8.77e-01 | 100.0% | 88.2% |
| 4481595 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.95 | 93.0 | 8.56e-01 | 100.0% | 82.4% |
| 3386562 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.95 | 92.0 | 8.57e-01 | 100.0% | 83.4% |
| 3968133 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.95 | 93.0 | 8.38e-01 | 100.0% | 80.3% |
| 4488174 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.95 | 93.0 | 8.57e-01 | 100.0% | 83.0% |
| 3470297 | 150.1.2.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase | 0.94 | 87.0 | 8.02e-01 | 100.0% | 77.6% |
| 4603349 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.93 | 87.0 | 7.81e-01 | 100.0% | 73.5% |
| 2388926 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.93 | 90.0 | 8.68e-01 | 100.0% | 91.0% |
| 56563 | 150.1.2.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase | 0.93 | 87.0 | 8.58e-01 | 100.0% | 92.6% |
| 162837 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.92 | 83.0 | 8.17e-01 | 100.0% | 87.5% |
| 4340194 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.92 | 88.0 | 8.42e-01 | 100.0% | 88.2% |
| 2846952 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.91 | 85.0 | 8.04e-01 | 100.0% | 83.7% |
| 2391405 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.91 | 85.0 | 8.05e-01 | 100.0% | 83.8% |
| 151585 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.91 | 84.0 | 8.54e-01 | 99.6% | 97.0% |
| 4026999 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.90 | 84.0 | 8.03e-01 | 100.0% | 84.5% |
| 5009507 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.90 | 84.0 | 7.84e-01 | 95.6% | 85.8% |
| 5009513 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.90 | 84.0 | 7.84e-01 | 95.6% | 87.5% |
| 5009559 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.89 | 83.0 | 7.93e-01 | 96.0% | 85.2% |
| 1684591 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.89 | 82.0 | 8.11e-01 | 95.6% | 93.4% |
| 4267558 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.86 | 83.0 | 7.82e-01 | 100.0% | 91.5% |
| 4287776 | 150.1.2.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Phenol_Hydrox | 0.83 | 78.0 | 7.09e-01 | 97.4% | 90.6% |
| 56630 | 150.1.2.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase | 0.81 | 74.0 | 6.97e-01 | 95.3% | 93.5% |
| 5009415 | 150.1.2.20 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Rubrerythrin | 0.80 | 75.0 | 7.31e-01 | 98.5% | 99.3% |
| 3284093 | 150.1.1.132 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › AurF | 0.78 | 75.0 | 7.07e-01 | 100.0% | 96.6% |
| 3959806 | 150.1.2.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase | 0.77 | 73.0 | 6.88e-01 | 100.0% | 94.5% |
| 3957842 | 150.1.2.10 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › AurF | 0.76 | 73.0 | 7.08e-01 | 99.6% | 96.9% |
| 3606445 | 150.1.1.4 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › COQ7 | 0.75 | 51.0 | 6.03e-01 | 74.8% | 96.4% |
| 3283793 | 150.1.2.14 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Metal_hydrol | 0.72 | 65.0 | 6.49e-01 | 95.6% | 92.9% |
| 3286918 | 150.1.2.14 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Metal_hydrol | 0.71 | 63.0 | 6.24e-01 | 95.6% | 88.3% |
| 3864955 | 633.22.1.6 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) › TMD0_ABC | 0.58 | 36.0 | 4.40e-01 | 86.9% | 96.5% |
| 4503538 | 633.26.1.4 ↗ | alpha bundles › Bromodomain-like › SidC lipid-binding domain › SidC lipid-binding domain › TMD0_ABC | 0.58 | 36.0 | 4.30e-01 | 86.9% | 91.1% |
| 3718646 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.56 | 37.0 | 3.78e-01 | 94.5% | 65.6% |
| 3474037 | 150.1.1.36 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Otopetrin | 0.54 | 37.0 | 4.01e-01 | 86.5% | 79.2% |
| 3924530 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.52 | 41.0 | 3.78e-01 | 80.3% | 96.3% |
| 4985781 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.52 | 35.0 | 4.21e-01 | 74.5% | 98.4% |
| 3931575 | 603.1.1.109 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF267 | 0.51 | 44.0 | 4.13e-01 | 88.7% | 87.4% |
| 4600042 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 39.0 | 4.36e-01 | 84.3% | 99.5% |