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IMGVR_UViG_3300025018_000793-3300025018-Ga0210043_10021981

Arc-Vir

IMGVR_UViG_3300025018_000793-3300025018-Ga0210043_10021981

Quality

68.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-108
PDB
D2 medium residues 109-135_274-379
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24801.2 best FNIII-A_GpJ 53.5 3.80e-14 78.2% 73.8%
D3 medium residues 157-192_211-273
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fa1A00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.54 40.0 3.45e-01 77.8% 91.2%
3byqA00 3.30.1330.110 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 0.52 47.0 3.80e-01 100.0% 79.6%
1llaA02 2.60.40.1520 Mainly Beta › Sandwich › Immunoglobulin-like › Hemocyanin, C-terminal domain 0.51 39.0 3.06e-01 85.9% 49.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.52 40.0 2.95e-01 83.8% 96.2%
1385365 11.1.1.61 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Hemocyanin_C 0.52 40.0 3.17e-01 85.9% 57.0%
3693430 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.51 42.0 3.51e-01 90.9% 98.4%
1308513 11.1.1.61 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Hemocyanin_C 0.51 39.0 3.02e-01 85.9% 46.9%
4000026 2.1.1.179 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REV3_N 0.51 26.0 3.43e-01 79.8% 96.0%