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IMGVR_UViG_3300025035_001128-3300025035-Ga0210011_10001321

Arc-Vir

IMGVR_UViG_3300025035_001128-3300025035-Ga0210011_10001321

Quality

85.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-125
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4zvaA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.71 62.0 5.21e-01 100.0% 63.1%
4in3B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 53.0 3.16e-01 100.0% 12.1%
3nowA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.67 58.0 3.84e-01 98.8% 28.5%
1c02A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.66 59.0 4.69e-01 98.8% 72.3%
2iiuA00 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.63 54.0 4.05e-01 94.0% 91.3%
2oebA00 1.10.520.30 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain 0.62 44.0 3.65e-01 73.8% 94.1%
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.61 51.0 4.84e-01 98.8% 75.0%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.61 48.0 4.65e-01 89.3% 75.0%
1wrdA00 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 54.0 5.11e-01 95.2% 86.7%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 52.0 4.88e-01 92.9% 89.3%
3piwA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.60 44.0 3.63e-01 77.4% 62.3%
4adnA01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.60 43.0 4.36e-01 94.0% 74.1%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.60 51.0 5.10e-01 90.5% 100.0%
3vtxB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 42.0 3.25e-01 95.2% 33.3%
3k9iA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 44.0 4.09e-01 97.6% 62.1%
4u72A01 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 53.0 3.95e-01 100.0% 63.5%
4an8A02 1.10.132.100 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.59 53.0 4.70e-01 100.0% 94.3%
1a17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 44.0 3.53e-01 100.0% 41.5%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.59 52.0 4.91e-01 95.2% 91.8%
2yfaB01 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.59 51.0 4.58e-01 97.6% 88.2%
5wp3B00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.58 46.0 4.32e-01 85.7% 98.0%
2wy4A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 49.0 4.30e-01 100.0% 66.2%
3pe0A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 50.0 4.61e-01 95.2% 89.6%
6yz2A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.57 52.0 4.60e-01 98.8% 76.7%
5mdtA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 49.0 4.11e-01 100.0% 85.5%
6xz3A01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.56 51.0 4.53e-01 98.8% 89.7%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.56 41.0 3.24e-01 77.4% 74.6%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.56 51.0 4.53e-01 98.8% 76.1%
6t0bc02 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.56 50.0 3.77e-01 97.6% 57.1%
1cnt200 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.55 51.0 4.33e-01 98.8% 88.5%
1st6A01 1.20.120.810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle 0.55 49.0 3.44e-01 97.6% 40.8%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 49.0 4.75e-01 96.4% 95.7%
5djsA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 43.0 3.55e-01 82.1% 79.0%
2w3cA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.55 48.0 3.42e-01 98.8% 31.3%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 42.0 3.51e-01 84.5% 80.9%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 47.0 4.40e-01 95.2% 88.1%
5c9eB01 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.54 44.0 4.43e-01 98.8% 94.3%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 42.0 3.85e-01 89.3% 88.3%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.53 48.0 4.67e-01 100.0% 90.3%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 46.0 4.47e-01 97.6% 94.8%
3pe0A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 43.0 4.05e-01 89.3% 94.1%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.52 45.0 4.14e-01 96.4% 90.9%
7qaqA01 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.52 43.0 3.32e-01 95.2% 38.0%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 43.0 4.00e-01 94.0% 89.2%
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.51 46.0 4.42e-01 98.8% 86.3%
3mpiA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.51 43.0 3.94e-01 100.0% 68.6%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.51 43.0 4.00e-01 96.4% 89.3%
4dwlA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.51 44.0 4.04e-01 96.4% 75.0%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4034377 4982.1.1.2 alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › RsbU_N 0.73 62.0 6.06e-01 100.0% 87.8%
3302080 109.4.1.436 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nipped-B_C 0.72 65.0 3.91e-01 100.0% 19.4%
3718098 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 63.0 3.50e-01 100.0% 8.4%
4971089 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.68 59.0 4.83e-01 100.0% 86.1%
3903825 611.3.1.0 alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.67 53.0 5.28e-01 97.6% 82.4%
3594516 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.66 56.0 4.27e-01 90.5% 88.6%
4029359 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 54.0 4.63e-01 94.0% 82.9%
3912433 603.1.1.5 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.62 54.0 4.56e-01 94.0% 78.5%
3506862 611.3.1.0 alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.62 51.0 5.21e-01 97.6% 92.5%
3743554 603.1.1.99 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 0.61 57.0 4.71e-01 100.0% 80.7%
3472981 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.61 56.0 4.45e-01 98.8% 81.9%
3270116 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.61 55.0 5.29e-01 96.4% 96.8%
4017645 603.1.1.6 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.61 56.0 4.24e-01 98.8% 96.8%
5041130 601.14.1.0 alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin 0.60 47.0 4.10e-01 82.1% 85.6%
3573559 604.3.1.1 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.60 52.0 4.56e-01 94.0% 83.3%
3516461 603.1.1.103 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.60 51.0 4.62e-01 90.5% 82.7%
3673003 3922.1.1.254 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › NET2A_C 0.59 53.0 4.56e-01 95.2% 86.4%
3593230 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.59 52.0 4.32e-01 94.0% 63.6%
3736616 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.59 52.0 3.44e-01 95.2% 32.1%
4072081 603.1.1.5 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.59 55.0 3.96e-01 100.0% 76.7%
3880244 603.2.1.24 alpha bundles › STAT-like › STAT › STAT › TBCA_PH 0.58 54.0 4.34e-01 100.0% 94.2%
3367913 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.58 50.0 4.22e-01 94.0% 77.1%
3677692 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.58 48.0 4.01e-01 90.5% 89.0%
3681637 603.1.1.5 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.58 54.0 4.14e-01 100.0% 59.4%
4015415 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.58 49.0 3.84e-01 91.7% 52.0%
4973300 1075.5.1.4 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt 0.58 42.0 3.19e-01 77.4% 39.0%
3780523 633.23.1.34 alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 0.58 46.0 3.76e-01 86.9% 67.5%
3580347 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.58 51.0 4.74e-01 96.4% 88.6%
3532924 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.58 46.0 3.68e-01 86.9% 63.5%
4955775 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.57 49.0 3.81e-01 96.4% 92.3%
3315617 603.1.1.1 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.57 51.0 3.78e-01 100.0% 75.6%
3388439 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.57 49.0 3.47e-01 95.2% 40.4%
3897603 109.4.1.1286 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 0.57 50.0 2.83e-01 100.0% 64.5%
3634960 603.1.1.5 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.57 49.0 4.50e-01 95.2% 89.1%
5018283 633.10.1.0 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.56 43.0 4.10e-01 94.0% 69.0%
3924650 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 43.0 4.13e-01 83.3% 82.0%
2060710 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.56 48.0 4.37e-01 92.9% 82.0%
3565766 603.1.1.103 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 0.56 52.0 4.11e-01 100.0% 61.3%
4663621 603.2.1.0 alpha bundles › STAT-like › STAT › STAT 0.56 47.0 4.11e-01 94.0% 86.9%
3996707 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 44.0 4.09e-01 86.9% 86.4%
3934928 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 49.0 4.70e-01 96.4% 91.6%
3596865 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 49.0 3.81e-01 100.0% 46.1%
3588615 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 48.0 4.76e-01 97.6% 91.1%
3249529 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.54 49.0 4.15e-01 98.8% 81.5%
3465357 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.54 46.0 4.20e-01 95.2% 81.7%
4034192 603.1.1.11 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF3169 0.54 43.0 3.32e-01 89.3% 59.0%
3729025 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 48.0 3.99e-01 97.6% 68.3%
3611383 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.54 47.0 4.31e-01 97.6% 80.9%
3696767 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.54 47.0 3.08e-01 100.0% 49.3%
4195230 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.53 47.0 4.13e-01 94.0% 91.7%
3991299 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.53 46.0 4.61e-01 97.6% 96.5%
3933742 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.53 42.0 3.41e-01 84.5% 60.0%
3786282 603.1.1.5 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.53 41.0 3.71e-01 85.7% 69.2%
3934336 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 48.0 3.65e-01 100.0% 51.1%
3391380 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.52 44.0 4.12e-01 94.0% 85.7%
3999485 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 43.0 3.68e-01 95.2% 70.8%
3800611 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.51 44.0 2.98e-01 98.8% 33.0%
3263522 5050.1.1.11 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › UNC-93 0.51 43.0 3.31e-01 96.4% 92.2%
3618161 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.50 44.0 3.88e-01 100.0% 68.5%