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IMGVR_UViG_3300025036_000048-3300025036-Ga0210049_100371818
Arc-VirIMGVR_UViG_3300025036_000048-3300025036-Ga0210049_100371818
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-120
Domain cluster:
rep: KR060090.1__AKN44339.1__X__00056__D234-334
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 59.0 | 5.42e-01 | 100.0% | 89.8% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.62 | 47.0 | 4.57e-01 | 100.0% | 72.6% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.61 | 39.0 | 4.06e-01 | 97.1% | 69.0% |
| 2v4jB01 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 34.0 | 3.18e-01 | 97.1% | 43.2% |
| 4feuF01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 36.0 | 4.18e-01 | 98.1% | 87.7% |
| 2clqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 37.0 | 4.07e-01 | 100.0% | 77.6% |
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 33.0 | 3.65e-01 | 81.0% | 68.6% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.57 | 37.0 | 3.78e-01 | 96.2% | 69.4% |
| 2y4iB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 36.0 | 3.79e-01 | 100.0% | 72.5% |
| 4gf3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 34.0 | 3.31e-01 | 100.0% | 52.0% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.54 | 48.0 | 3.84e-01 | 100.0% | 61.9% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 33.0 | 3.27e-01 | 100.0% | 58.6% |
| 2kcuA00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.52 | 32.0 | 2.85e-01 | 96.2% | 38.6% |
| 3i1aA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 34.0 | 3.43e-01 | 100.0% | 66.0% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.20e-01 | 95.2% | 78.3% |
| 6qdws00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.51 | 43.0 | 4.29e-01 | 92.4% | 100.0% |
| 4itjB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 32.0 | 3.43e-01 | 98.1% | 73.9% |
| 2govA01 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.51 | 35.0 | 3.03e-01 | 98.1% | 43.9% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.50 | 43.0 | 3.98e-01 | 100.0% | 74.3% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965192 | 1.1.13.67 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 | 0.78 | 71.0 | 6.96e-01 | 100.0% | 91.2% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.76 | 66.0 | 6.63e-01 | 100.0% | 91.4% |
| 5004559 | 1.1.13.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube | 0.74 | 68.0 | 6.22e-01 | 100.0% | 85.9% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.73 | 64.0 | 6.32e-01 | 100.0% | 88.2% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.72 | 63.0 | 6.17e-01 | 100.0% | 87.8% |
| 1444177 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 59.0 | 5.43e-01 | 100.0% | 91.2% |
| 4888732 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.64 | 57.0 | 5.01e-01 | 100.0% | 78.8% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.62 | 56.0 | 5.22e-01 | 100.0% | 93.8% |
| 5055840 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.59 | 40.0 | 3.92e-01 | 71.4% | 64.0% |
| 3096576 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 51.0 | 4.57e-01 | 100.0% | 86.2% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.58 | 51.0 | 4.73e-01 | 100.0% | 77.9% |
| 4982756 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.58 | 53.0 | 4.33e-01 | 100.0% | 91.6% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 51.0 | 4.80e-01 | 100.0% | 96.9% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.58 | 51.0 | 3.83e-01 | 100.0% | 58.5% |
| 4956927 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.58 | 33.0 | 2.89e-01 | 100.0% | 38.1% |
| 3398140 | 4.1.1.326 ↗ | beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 | 0.56 | 27.0 | 3.22e-01 | 100.0% | 65.3% |
| 3967156 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.56 | 32.0 | 3.49e-01 | 99.0% | 70.0% |
| 3702663 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.55 | 43.0 | 3.87e-01 | 100.0% | 60.7% |
| 5047447 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 38.0 | 3.68e-01 | 89.5% | 65.0% |
| 4888780 | 304.124.1.5 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › T4-gp15_tss | 0.53 | 48.0 | 3.71e-01 | 100.0% | 64.5% |
| 4971295 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.52 | 33.0 | 3.42e-01 | 100.0% | 68.4% |
| 3763834 | 11.1.1.819 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PTHB1_GAE | 0.52 | 37.0 | 3.53e-01 | 100.0% | 62.4% |