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IMGVR_UViG_3300025067_000009-3300025067-Ga0209393_10007765
Arc-VirIMGVR_UViG_3300025067_000009-3300025067-Ga0209393_10007765
Identity
- Kingdom:
- archaea
Quality
95.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-81
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.64 | 44.0 | 3.69e-01 | 71.2% | 90.7% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.62 | 45.0 | 4.51e-01 | 100.0% | 74.4% |
| 4fvmA07 | 1.20.1280.310 | Mainly Alpha › Up-down Bundle › Monooxygenase › B family DNA polymerase, thumb domain, four helix bundle | 0.61 | 33.0 | 3.63e-01 | 78.8% | 64.6% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.60 | 41.0 | 3.70e-01 | 70.0% | 65.2% |
| 2ii2A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.60 | 37.0 | 3.51e-01 | 73.8% | 50.0% |
| 1n00A01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.58 | 35.0 | 3.53e-01 | 73.8% | 57.1% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 37.0 | 4.06e-01 | 81.2% | 83.1% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 48.0 | 3.95e-01 | 98.8% | 61.7% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 3.93e-01 | 80.0% | 100.0% |
| 2l5qA02 | 1.10.10.1650 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 46.0 | 4.44e-01 | 100.0% | 92.4% |
| 1n62C02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.53 | 44.0 | 4.05e-01 | 93.8% | 95.2% |
| 6j09A04 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 38.0 | 3.85e-01 | 78.8% | 89.6% |
| 4zohB03 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.51 | 42.0 | 3.96e-01 | 93.8% | 95.1% |
| 2w3sA05 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.51 | 42.0 | 3.94e-01 | 95.0% | 97.1% |
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.50 | 42.0 | 3.64e-01 | 96.2% | 85.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927432 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.89 | 73.0 | 7.37e-01 | 86.3% | 95.0% |
| 3593009 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.70 | 36.0 | 3.68e-01 | 88.7% | 51.2% |
| 3729121 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.69 | 33.0 | 3.50e-01 | 87.5% | 50.0% |
| 3191588 | 610.3.1.0 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain | 0.59 | 48.0 | 3.65e-01 | 95.0% | 35.8% |
| 3703191 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.57 | 39.0 | 3.59e-01 | 88.7% | 56.0% |
| 3469087 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.57 | 40.0 | 4.26e-01 | 93.8% | 85.7% |
| 3931796 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.57 | 34.0 | 3.25e-01 | 77.5% | 48.0% |
| 2870910 | 3640.1.1.0 ↗ | alpha duplicates or obligate multimers › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain › Minor ampullate fibroin 1 C-terminal domain | 0.56 | 41.0 | 4.03e-01 | 100.0% | 70.8% |
| 3967708 | 179.1.1.1 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 | 0.54 | 46.0 | 4.43e-01 | 96.2% | 82.2% |
| 5051839 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.54 | 38.0 | 3.81e-01 | 73.8% | 100.0% |
| 5076493 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.53 | 44.0 | 4.04e-01 | 93.8% | 92.7% |
| 4983770 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.53 | 46.0 | 4.14e-01 | 96.2% | 92.7% |
| 3349005 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 39.0 | 4.05e-01 | 95.0% | 85.3% |
| 3571420 | 220.1.1.130 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_21 | 0.52 | 47.0 | 3.51e-01 | 100.0% | 59.0% |
| 3340741 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 38.0 | 3.97e-01 | 90.0% | 86.7% |
| 3511966 | 178.1.1.0 ↗ | alpha arrays › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB/MDM2 domain | 0.51 | 37.0 | 3.59e-01 | 80.0% | 91.6% |
| 5061403 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.51 | 43.0 | 3.90e-01 | 95.0% | 93.6% |
| 3968363 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.51 | 32.0 | 3.59e-01 | 92.5% | 85.0% |