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IMGVR_UViG_3300025078_000356-3300025078-Ga0208668_10016121

Arc-Vir

IMGVR_UViG_3300025078_000356-3300025078-Ga0208668_10016121

Quality

84.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 197-248
PDB
D2 medium residues 109-151
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d9xA01 6.20.50.100 Special › Other non-globular › N-terminal domain of TfIIb › 0.74 60.0 5.82e-01 97.7% 88.0%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.69 55.0 3.97e-01 97.7% 81.2%
3h09B02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.61 46.0 2.64e-01 88.4% 18.6%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 2.65e-01 100.0% 41.5%
4l22A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 36.0 2.13e-01 74.4% 77.6%
2b5iD01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.52 41.0 3.72e-01 97.7% 97.0%
1vx7H01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.51 38.0 3.19e-01 86.0% 74.1%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 40.0 3.44e-01 86.0% 79.4%
3petA00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.51 35.0 2.41e-01 81.4% 18.3%
1g8mA02 3.40.140.20 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain 0.51 39.0 2.77e-01 95.3% 47.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1141891 716.1.1.0 beta duplicates or obligate multimers › Trimeric autotransporter adhesin Trp ring domain › Trimeric autotransporter adhesin Trp ring domain › Trimeric autotransporter adhesin Trp ring domain 0.74 60.0 5.94e-01 97.7% 95.7%
2123689 881.1.1.10 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Tli4_N 0.58 47.0 3.44e-01 100.0% 76.8%
3222229 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.51 38.0 2.56e-01 88.4% 20.5%
3184235 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.50 35.0 2.58e-01 79.1% 51.0%
D3 medium residues 273-332
PDB
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3493367 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.52 38.0 2.84e-01 83.3% 91.4%