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IMGVR_UViG_3300025082_000053-3300025082-Ga0208156_100022132

Arc-Vir

IMGVR_UViG_3300025082_000053-3300025082-Ga0208156_100022132

Quality

63.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 485-556
PDB
D2 medium residues 641-693
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.57 43.0 3.16e-01 88.7% 60.2%
4fbcA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.52 42.0 3.05e-01 96.2% 56.3%
3lovA02 3.90.660.20 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › Protoporphyrinogen oxidase, mitochondrial; domain 2 0.52 37.0 2.60e-01 79.2% 92.1%
2k4jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.18e-01 86.8% 75.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3994442 5.1.2.34 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › PQQ_2 0.53 41.0 3.21e-01 98.1% 72.0%
4941102 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.52 42.0 2.68e-01 90.6% 48.7%
3602674 2008.1.1.114 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 0.52 39.0 3.25e-01 84.9% 86.0%
D3 medium residues 708-765
PDB
D4 medium residues 788-882
PDB
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fkiA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.65 35.0 3.23e-01 76.8% 41.5%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.52 41.0 2.85e-01 89.5% 45.4%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 44.0 2.99e-01 97.9% 52.1%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.51 42.0 2.92e-01 94.7% 61.5%
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 42.0 2.94e-01 95.8% 69.0%
1uhzA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 33.0 3.40e-01 90.5% 70.8%
3b8bA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.50 39.0 3.29e-01 82.1% 71.1%
4agiA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.50 41.0 2.98e-01 93.7% 55.7%
2i5bA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.50 41.0 3.06e-01 92.6% 55.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3380722 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.54 46.0 3.41e-01 96.8% 64.5%
3832313 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.54 43.0 3.09e-01 90.5% 58.5%
2672137 5.1.3.3 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur 0.53 44.0 3.03e-01 95.8% 57.0%
3719189 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 43.0 3.34e-01 93.7% 76.2%
144144 5.1.3.3 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur 0.52 43.0 2.94e-01 93.7% 72.1%
3936023 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 42.0 3.03e-01 94.7% 63.2%