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IMGVR_UViG_3300025109_000069-3300025109-Ga0208553_10001981
Arc-VirIMGVR_UViG_3300025109_000069-3300025109-Ga0208553_10001981
Identity
- Kingdom:
- archaea
Quality
82.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 161-322
Domain cluster:
rep: IMGVR_UViG_3300035205_000971-3300035205-Ga0373649_0000811_39963_41081__D138-368
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s7mA03 | 2.20.25.140 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.74 | 15.0 | 3.78e-01 | 86.4% | 100.0% |
| 2qlvB02 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.65 | 18.0 | 3.53e-01 | 94.4% | 97.4% |
| 1o9aA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.60 | 15.0 | 2.90e-01 | 71.6% | 75.0% |
| 1mknA00 | 2.20.60.10 | Mainly Beta › Single Sheet › Heparin-binding Growth Factor, Midkine; Chain A › Pleiotrophin/Midkine, N-terminal domain | 0.56 | 20.0 | 3.29e-01 | 71.6% | 88.1% |
| 1nnvA01 | 3.10.450.140 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative | 0.54 | 34.0 | 4.17e-01 | 90.7% | 100.0% |
| 4akmB00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 31.0 | 3.14e-01 | 96.3% | 56.7% |
| 3emiA00 | 3.90.1780.10 | Alpha Beta › Alpha-Beta Complex › Trimeric adhesin › Trimeric adhesin | 0.52 | 18.0 | 2.17e-01 | 84.0% | 43.6% |
| 3tqeA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.52 | 22.0 | 3.16e-01 | 75.9% | 86.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4440042 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.58 | 19.0 | 2.63e-01 | 95.7% | 51.2% |
| 3644266 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 26.0 | 3.15e-01 | 71.6% | 65.0% |
| 5038562 | 205.1.1.8 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › ETF_QO | 0.52 | 26.0 | 3.22e-01 | 77.2% | 76.0% |
D2
high
residues 360-484_548-634
Domain cluster:
rep: IMGVR_UViG_3300025131_000272-3300025131-Ga0209128_10004802__D922-1044_1103-1195
D3
medium
residues 485-547
Domain cluster:
rep: IMGVR_UViG_3300034992_000350-3300034992-Ga0392516_03063_10_2187__D569-636