←Back to structures
IMGVR_UViG_3300025117_001557-3300025117-Ga0208958_100056112
Arc-VirIMGVR_UViG_3300025117_001557-3300025117-Ga0208958_100056112
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 57-119
Domain cluster:
rep: MW584206.1__QSM04898.1__PROPHIGD91-4_47__00047__D13-71
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01844.30 best | HNH | 48.0 | 1.50e-12 | 73.0% | 89.4% |
| PF13391.13 | HNH_2 | 24.1 | 3.80e-05 | 71.4% | 85.1% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.77 | 69.0 | 6.27e-01 | 100.0% | 77.1% |
| 1e7lA01 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.77 | 66.0 | 6.12e-01 | 100.0% | 75.0% |
| 1pzwA00 | 3.40.1800.20 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › | 0.61 | 45.0 | 4.16e-01 | 79.4% | 76.2% |
| 2x5rA01 | 3.30.470.40 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.57 | 41.0 | 3.55e-01 | 96.8% | 44.3% |
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.57 | 35.0 | 3.88e-01 | 79.4% | 86.7% |
| 3t7lA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 47.0 | 4.48e-01 | 95.2% | 81.1% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937899 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.94 | 83.0 | 7.16e-01 | 100.0% | 64.4% |
| 5080395 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.93 | 89.0 | 7.02e-01 | 100.0% | 56.5% |
| 4959591 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.90 | 80.0 | 7.96e-01 | 100.0% | 92.3% |
| 2628026 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.89 | 76.0 | 5.13e-01 | 100.0% | 28.2% |
| 3963335 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.89 | 79.0 | 6.15e-01 | 100.0% | 47.3% |
| 3588377 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.89 | 84.0 | 7.01e-01 | 100.0% | 63.0% |
| 5082962 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.89 | 78.0 | 6.33e-01 | 100.0% | 53.6% |
| 3590055 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.89 | 79.0 | 6.35e-01 | 100.0% | 53.0% |
| 5080086 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.87 | 79.0 | 7.18e-01 | 100.0% | 75.0% |
| 2036620 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.86 | 81.0 | 6.97e-01 | 100.0% | 68.5% |
| 3210225 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.85 | 80.0 | 6.24e-01 | 100.0% | 52.5% |
| 5073918 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.84 | 78.0 | 6.70e-01 | 100.0% | 67.4% |
| 4974548 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.84 | 79.0 | 7.34e-01 | 100.0% | 90.8% |
| 4951302 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.83 | 70.0 | 6.93e-01 | 96.8% | 89.2% |
| 3209528 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.82 | 75.0 | 5.75e-01 | 100.0% | 48.9% |
| 3981149 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.82 | 75.0 | 6.94e-01 | 100.0% | 81.0% |
| 4964156 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.82 | 74.0 | 6.01e-01 | 100.0% | 57.4% |
| 4959590 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.81 | 73.0 | 6.58e-01 | 100.0% | 72.9% |
| 3944337 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.81 | 73.0 | 5.66e-01 | 100.0% | 52.6% |
| 3685300 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.80 | 72.0 | 4.88e-01 | 100.0% | 39.5% |
| 3839237 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.80 | 74.0 | 5.27e-01 | 100.0% | 39.4% |
| 4021924 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.80 | 73.0 | 4.69e-01 | 100.0% | 34.6% |
| 3976723 | 378.1.1.28 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NinG | 0.77 | 69.0 | 5.47e-01 | 100.0% | 52.0% |
| 3196822 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.76 | 68.0 | 4.83e-01 | 100.0% | 51.1% |
| 2859872 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.75 | 63.0 | 4.51e-01 | 98.4% | 31.7% |
| 3915497 | 378.1.2.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › Tox-GHH | 0.71 | 60.0 | 5.33e-01 | 93.7% | 80.0% |
| 3286852 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.69 | 63.0 | 5.35e-01 | 100.0% | 67.0% |
| 3715952 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.66 | 48.0 | 4.33e-01 | 100.0% | 55.6% |
| 4160988 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.57 | 45.0 | 2.95e-01 | 88.9% | 89.3% |
| None | — | 0.56 | 43.0 | 2.91e-01 | 90.5% | 90.5% | |
| 3595907 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 45.0 | 2.98e-01 | 92.1% | 93.0% |
| 3210408 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.53 | 44.0 | 4.25e-01 | 96.8% | 80.0% |
| 4612009 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 42.0 | 2.83e-01 | 90.5% | 93.9% |
| None | — | 0.53 | 42.0 | 2.88e-01 | 93.7% | 95.4% | |
| 3592809 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.50 | 39.0 | 2.79e-01 | 100.0% | 25.9% |