←Back to structures

IMGVR_UViG_3300025129_000580-3300025129-Ga0210027_1000086131

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300025129_000580-3300025129-Ga0210027_1000086131 ↗
Kingdom:: archaea

Quality

83.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-112

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3tp3A02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.61	39.0	3.45e-01	99.0%	45.9%
7cjnB01	1.20.1250.70	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21	0.57	39.0	3.87e-01	100.0%	65.2%
4qnsA00	1.20.920.10	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like	0.57	43.0	4.33e-01	99.0%	80.2%
1f02T00	4.10.820.10	Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain	0.54	30.0	3.63e-01	90.5%	84.8%
3nz4B03	1.10.274.20	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3	0.54	36.0	3.71e-01	98.1%	69.2%
2chnB03	1.20.58.460	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like	0.53	46.0	3.95e-01	100.0%	76.7%
1u89A00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.51	44.0	4.07e-01	95.2%	78.4%
3bniB00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.51	37.0	3.19e-01	77.1%	57.3%
2psmA00	1.20.1250.70	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21	0.50	37.0	3.63e-01	98.1%	70.9%
1w0bA01	1.20.58.420	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP	0.50	35.0	3.74e-01	100.0%	84.8%
6lccA01	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.50	39.0	2.79e-01	86.7%	55.4%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4954327	604.39.1.1 ↗	alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › CbiM	0.56	47.0	3.83e-01	94.3%	83.4%
3184752	620.1.1.4 ↗	alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DUF1993	0.54	41.0	3.58e-01	82.9%	98.2%
3472674	133.1.1.1 ↗	alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF	0.53	46.0	3.63e-01	100.0%	85.5%
3880737	601.1.2.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608)	0.52	39.0	3.24e-01	78.1%	57.3%
3960440	3352.1.1.0 ↗	alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain	0.52	40.0	2.82e-01	84.8%	60.3%
3788006	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.51	43.0	2.84e-01	95.2%	48.3%
3939448	3948.1.1.0 ↗	alpha bundles › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain	0.50	44.0	3.83e-01	99.0%	95.9%
3953379	3352.1.1.15 ↗	alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › GT87	0.50	40.0	2.83e-01	90.5%	71.3%