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IMGVR_UViG_3300025146_000547-3300025146-Ga0209322_1000258210

Arc-Vir

IMGVR_UViG_3300025146_000547-3300025146-Ga0209322_1000258210

Quality

91.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 335-410
PDB
CATH (91)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 66.0 7.30e-01 90.8% 98.4%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 66.0 7.27e-01 90.8% 100.0%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.84 73.0 7.60e-01 90.8% 100.0%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 67.0 5.80e-01 93.4% 58.2%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 65.0 6.91e-01 90.8% 93.9%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 66.0 7.07e-01 90.8% 98.5%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 70.0 6.81e-01 93.4% 82.9%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 65.0 6.07e-01 93.4% 68.8%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 65.0 7.03e-01 88.2% 100.0%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 64.0 7.02e-01 90.8% 100.0%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 65.0 6.98e-01 86.8% 100.0%
3f6oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 65.0 6.13e-01 94.7% 71.4%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 72.0 6.93e-01 96.1% 88.1%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 6.42e-01 90.8% 75.8%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.81 71.0 5.49e-01 94.7% 59.6%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 6.75e-01 90.8% 96.0%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 68.0 7.03e-01 100.0% 98.6%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 6.72e-01 92.1% 98.5%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 6.52e-01 85.5% 98.3%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 5.72e-01 93.4% 66.7%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 6.61e-01 90.8% 89.3%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 5.61e-01 93.4% 61.5%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 69.0 6.53e-01 93.4% 78.9%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 69.0 6.43e-01 93.4% 76.3%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 6.53e-01 93.4% 82.4%
3bz6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 71.0 6.67e-01 97.4% 93.3%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 5.64e-01 93.4% 63.6%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 5.82e-01 93.4% 68.8%
3k69A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 63.0 5.02e-01 93.4% 44.0%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 6.50e-01 92.1% 86.9%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 5.77e-01 93.4% 68.1%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 6.28e-01 89.5% 81.2%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 6.39e-01 90.8% 82.1%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 6.92e-01 90.8% 100.0%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 6.42e-01 89.5% 100.0%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 68.0 6.67e-01 94.7% 90.1%
1r1tA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 61.0 5.55e-01 92.1% 64.3%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.61e-01 94.7% 59.0%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 5.48e-01 94.7% 60.2%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.78 60.0 5.56e-01 93.4% 66.7%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 6.22e-01 90.8% 83.3%
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 6.62e-01 98.7% 97.1%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 6.33e-01 90.8% 96.3%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.79e-01 96.1% 95.9%
2pg4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 6.33e-01 94.7% 79.1%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 6.75e-01 94.7% 98.6%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 6.92e-01 100.0% 98.7%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 6.13e-01 96.1% 81.7%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 6.49e-01 96.1% 83.9%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.31e-01 93.4% 81.4%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 6.37e-01 94.7% 81.1%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 6.22e-01 94.7% 79.3%
3qphA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.61e-01 100.0% 67.0%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.75e-01 93.4% 71.3%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 5.37e-01 94.7% 52.9%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 60.0 6.01e-01 92.1% 84.4%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 68.0 5.12e-01 96.1% 48.2%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 6.11e-01 92.1% 79.3%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.97e-01 96.1% 72.4%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 6.21e-01 92.1% 82.4%
1oyiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 6.13e-01 82.9% 98.4%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 6.08e-01 90.8% 82.9%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 6.02e-01 96.1% 81.0%
3cuqC01 1.10.10.570 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" 0.75 62.0 5.73e-01 90.8% 74.5%
1fokA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.88e-01 94.7% 78.2%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.95e-01 100.0% 81.2%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.87e-01 97.4% 77.8%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 6.19e-01 89.5% 100.0%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 6.38e-01 97.4% 92.4%
1fp2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.79e-01 93.4% 75.0%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.88e-01 93.4% 81.2%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.73e-01 96.1% 71.3%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.06e-01 94.7% 50.7%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.75e-01 88.2% 79.8%
2jscB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 5.62e-01 93.4% 80.0%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 5.11e-01 94.7% 52.9%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 55.0 5.67e-01 93.4% 87.5%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.56e-01 93.4% 72.3%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 4.97e-01 94.7% 50.0%
3htuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.83e-01 90.8% 100.0%
2hs5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.91e-01 90.8% 98.5%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.69 58.0 5.38e-01 96.1% 79.2%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.68 55.0 4.74e-01 90.8% 78.9%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 5.93e-01 98.7% 93.8%
1k78B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.05e-01 92.1% 84.3%
3jtgA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 5.23e-01 89.5% 100.0%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 50.0 4.71e-01 94.7% 75.0%
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.61 48.0 3.73e-01 86.8% 39.2%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.54e-01 96.1% 80.0%
2d9iA00 3.30.1370.110 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 47.0 4.43e-01 94.7% 79.2%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 40.0 4.11e-01 100.0% 85.3%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5023135 101.1.2.97 alpha arrays › HTH › HTH › winged helix domain › RPA_C 0.91 74.0 7.54e-01 89.5% 86.7%
5026919 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 71.0 7.20e-01 90.8% 86.7%
5069368 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.88 67.0 7.44e-01 88.2% 100.0%
4937110 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.87 71.0 7.17e-01 90.8% 86.7%
3840297 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 72.0 5.10e-01 93.4% 32.2%
5004094 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.87 71.0 7.60e-01 94.7% 100.0%
5069962 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.86 69.0 7.20e-01 93.4% 91.4%
5047052 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.86 69.0 5.19e-01 93.4% 38.1%
3401295 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 69.0 7.44e-01 92.1% 100.0%
5061511 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.86 69.0 7.38e-01 90.8% 100.0%
4969903 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 68.0 6.72e-01 93.4% 80.0%
5029044 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.85 68.0 6.16e-01 93.4% 64.6%
4981509 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 70.0 7.25e-01 96.1% 94.3%
5010717 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 72.0 7.28e-01 90.8% 90.7%
5006390 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.85 65.0 7.01e-01 89.5% 93.8%
5062256 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.85 67.0 6.21e-01 93.4% 67.4%
5082865 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 66.0 6.74e-01 92.1% 84.0%
5004095 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 68.0 6.54e-01 94.7% 76.5%
4989093 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 72.0 7.39e-01 93.4% 94.5%
5040361 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.84 65.0 5.77e-01 90.8% 59.0%
5041252 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.84 67.0 6.78e-01 92.1% 85.3%
4941358 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 67.0 6.62e-01 93.4% 80.0%
3808247 101.1.2.164 alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 0.83 64.0 6.93e-01 96.1% 95.4%
4007720 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 67.0 6.82e-01 92.1% 86.7%
4959343 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.83 72.0 6.82e-01 93.4% 91.1%
5053846 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.83 71.0 6.80e-01 94.7% 81.2%
4993580 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.82 65.0 6.94e-01 92.1% 96.9%
5082985 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 65.0 6.61e-01 93.4% 85.3%
5062268 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 67.0 7.04e-01 96.1% 97.1%
3602953 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 69.0 7.21e-01 93.4% 98.6%
5080736 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 55.0 5.47e-01 93.4% 66.3%
5069963 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 66.0 6.09e-01 94.7% 68.4%
5022936 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 70.0 6.11e-01 92.1% 67.3%
4988782 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.82 68.0 6.00e-01 93.4% 63.8%
3170419 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.82 68.0 5.36e-01 94.7% 45.3%
4027288 101.1.2.53 alpha arrays › HTH › HTH › winged helix domain › Mnd1 0.82 76.0 6.07e-01 100.0% 55.0%
4993968 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 67.0 6.56e-01 98.7% 80.7%
3781962 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.81 65.0 7.01e-01 89.5% 100.0%
4980031 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 62.0 6.62e-01 90.8% 93.8%
4679870 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 70.0 6.49e-01 94.7% 74.7%
3980485 101.1.2.842 alpha arrays › HTH › HTH › winged helix domain › PF28093 0.81 70.0 5.53e-01 94.7% 48.3%
3595354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 63.0 5.08e-01 88.2% 45.0%
4015761 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 71.0 6.50e-01 93.4% 74.7%
5079762 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.81 67.0 6.45e-01 94.7% 78.8%
3492410 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.81 65.0 5.33e-01 92.1% 48.9%
4028116 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.80 69.0 6.68e-01 97.4% 83.5%
3488598 101.1.2.601 alpha arrays › HTH › HTH › winged helix domain › TBPIP, LZ3wCH 0.80 65.0 4.74e-01 92.1% 33.8%
3270814 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.80 69.0 6.82e-01 97.4% 88.7%
5080102 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.80 64.0 6.79e-01 94.7% 100.0%
5031834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 70.0 6.60e-01 94.7% 83.3%
3738688 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.80 71.0 7.16e-01 98.7% 97.3%
4982329 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 64.0 6.36e-01 92.1% 81.2%
3712015 101.1.2.53 alpha arrays › HTH › HTH › winged helix domain › Mnd1 0.80 73.0 5.71e-01 100.0% 50.3%
3782579 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.80 67.0 5.46e-01 96.1% 51.1%
5043212 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 64.0 6.45e-01 100.0% 86.7%
5003316 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.79 72.0 6.52e-01 97.4% 81.0%
5012106 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.79 67.0 5.46e-01 93.4% 51.1%
3794506 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.79 68.0 4.89e-01 97.4% 34.6%
3493459 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.79 66.0 6.35e-01 97.4% 80.0%
3963899 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.79 61.0 5.91e-01 93.4% 74.1%
4204492 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 62.0 6.44e-01 93.4% 90.0%
4928268 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 6.49e-01 92.1% 82.4%
5041253 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 62.0 5.46e-01 94.7% 58.2%
4944019 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 66.0 6.63e-01 93.4% 90.7%
3742536 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.78 66.0 5.35e-01 97.4% 50.0%
5068402 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.78 66.0 6.27e-01 92.1% 77.8%
4960116 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 6.28e-01 94.7% 77.8%
3725361 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 6.33e-01 94.7% 78.9%
4026717 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 66.0 6.86e-01 92.1% 100.0%
3700393 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.77 67.0 4.77e-01 98.7% 33.5%
3506709 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.77 70.0 6.10e-01 97.4% 69.1%
5048665 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 4.68e-01 94.7% 33.7%
4961779 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 62.0 6.44e-01 94.7% 94.3%
3512685 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.77 69.0 5.65e-01 100.0% 66.9%
5064092 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.77 66.0 5.76e-01 98.7% 63.6%
5034713 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 67.0 6.05e-01 93.4% 71.0%
5053694 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 65.0 6.75e-01 94.7% 98.6%
4948576 101.1.2.37 alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.77 61.0 6.52e-01 89.5% 100.0%
5043893 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.76 65.0 6.73e-01 93.4% 100.0%
4951679 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.76 61.0 6.07e-01 98.7% 82.5%
4944350 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 64.0 6.27e-01 94.7% 83.1%
5033536 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 67.0 5.85e-01 94.7% 65.5%
4998355 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 66.0 5.88e-01 94.7% 67.6%
5049424 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 67.0 5.35e-01 96.1% 53.1%
3716093 101.1.2.169 alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 0.76 61.0 5.32e-01 94.7% 59.1%
3268538 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.76 61.0 5.26e-01 92.1% 56.5%
3390936 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.75 69.0 6.27e-01 100.0% 76.0%
4456406 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 62.0 5.72e-01 93.4% 70.5%
5003985 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.75 69.0 5.61e-01 100.0% 88.9%
5053762 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 6.26e-01 92.1% 89.3%
3671068 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.75 57.0 5.17e-01 82.9% 61.0%
4565603 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 66.0 6.38e-01 96.1% 87.1%
4961823 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 66.0 5.69e-01 96.1% 79.1%
5079818 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 63.0 5.96e-01 100.0% 77.8%
4985370 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 6.12e-01 96.1% 83.3%
4505043 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.73 65.0 5.23e-01 100.0% 51.7%
5035624 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.73 60.0 5.85e-01 93.4% 89.4%
3615681 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 5.29e-01 94.7% 61.8%
2070315 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.72 61.0 6.21e-01 97.4% 100.0%
5031078 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 62.0 5.61e-01 96.1% 73.0%
D2 medium residues 1-85
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13148.12 best DUF3987 32.7 6.80e-08 72.9% 13.5%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1knxE02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 35.0 2.72e-01 98.8% 29.1%
2b4vA01 1.10.1410.10 Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › 0.55 45.0 3.46e-01 95.3% 74.4%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.53 42.0 3.15e-01 87.1% 90.1%
2e5vA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 44.0 3.05e-01 94.1% 75.6%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4657745 109.4.1.2005 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HDS, Sec7-like_HUS 0.63 55.0 3.32e-01 97.6% 27.8%
4528525 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 54.0 3.09e-01 100.0% 56.8%
3943008 1075.3.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.58 42.0 3.13e-01 77.6% 96.5%
3408848 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 37.0 3.87e-01 92.9% 73.3%
3801312 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 36.0 3.59e-01 92.9% 60.0%
3169484 109.4.1.1289 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30856 0.57 48.0 2.78e-01 92.9% 35.0%
4348123 3236.1.1.16 alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Asp-Al_Ex 0.55 47.0 3.23e-01 100.0% 67.8%
3691819 5050.1.1.14 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › ATG22 0.55 40.0 3.04e-01 80.0% 74.8%
3942067 4120.1.1.44 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › TraD_N 0.54 39.0 3.64e-01 76.5% 66.4%
4024657 109.4.1.235 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 0.54 45.0 2.72e-01 92.9% 16.1%
3882820 5067.1.1.3 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.53 46.0 2.66e-01 100.0% 14.3%
4408503 192.2.1.43 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › TraD_N 0.53 40.0 3.46e-01 80.0% 56.3%
4490179 109.4.1.1289 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30856 0.53 46.0 3.04e-01 98.8% 48.3%
4416214 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.53 32.0 3.25e-01 91.8% 58.8%
4437948 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 30.0 3.21e-01 88.2% 64.3%
4998739 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.51 43.0 2.95e-01 97.6% 84.3%
4952268 323.1.1.2 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CAT 0.51 40.0 3.07e-01 85.9% 90.6%
5018781 323.1.1.2 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CAT 0.51 40.0 3.09e-01 87.1% 87.3%
3942972 323.1.1.2 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CAT 0.51 42.0 3.22e-01 95.3% 85.5%
4242186 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.51 43.0 3.14e-01 100.0% 95.3%