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IMGVR_UViG_3300025159_000188-3300025159-Ga0209619_1001092516

Arc-Vir

IMGVR_UViG_3300025159_000188-3300025159-Ga0209619_1001092516

Identity

Kingdom:
archaea

Quality

85.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-72
PDB
Domain cluster: rep: NC_054955.1__YP_010078187.1__KMC43_gp63__00063__D8-65
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tfmA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 47.0 4.14e-01 83.1% 74.3%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 47.0 3.64e-01 83.1% 65.0%
2p0hA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 44.0 3.83e-01 80.3% 85.6%
1z87A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 43.0 3.84e-01 81.7% 81.0%
4gouA02 2.30.29.200 Mainly Beta › Roll › PH-domain like › 0.56 41.0 3.28e-01 81.7% 60.8%
2rovA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.62e-01 83.1% 83.8%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 3.70e-01 83.1% 76.1%
4ms4B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 41.0 3.09e-01 81.7% 81.1%
3k5iA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.54 39.0 2.94e-01 78.9% 97.0%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 45.0 4.09e-01 97.2% 99.0%
3wyfE00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 39.0 3.20e-01 81.7% 59.2%
1u5dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 39.0 3.47e-01 81.7% 79.6%
2i9uA01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.52 39.0 3.44e-01 81.7% 91.9%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 43.0 2.89e-01 100.0% 52.4%
4rlzA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.51 41.0 3.65e-01 93.0% 99.1%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.50 43.0 3.88e-01 98.6% 99.0%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3413626 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 48.0 4.06e-01 83.1% 71.7%
3919311 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.62 47.0 3.95e-01 83.1% 73.6%
3749038 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 47.0 3.79e-01 83.1% 82.1%
3935486 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 45.0 3.85e-01 81.7% 79.2%
3801400 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 44.0 3.03e-01 81.7% 32.8%
3393055 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 46.0 3.86e-01 83.1% 80.0%
3754872 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.59 52.0 4.35e-01 98.6% 60.8%
3707991 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 44.0 3.52e-01 83.1% 90.0%
3869553 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 43.0 3.55e-01 81.7% 74.8%
3631814 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 42.0 3.41e-01 81.7% 83.3%
3393983 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.57 42.0 3.70e-01 80.3% 65.5%
4041523 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 42.0 3.66e-01 81.7% 81.7%
3777599 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 43.0 3.46e-01 81.7% 76.4%
3251345 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 3.32e-01 77.5% 63.6%
3976351 219.1.1.40 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like 0.56 48.0 3.44e-01 100.0% 50.8%
3249355 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 42.0 3.74e-01 83.1% 76.4%
3763418 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 42.0 3.94e-01 81.7% 84.4%
5039871 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 39.0 2.78e-01 76.1% 90.8%
3266701 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 42.0 3.20e-01 81.7% 85.0%
3477604 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 41.0 3.28e-01 81.7% 70.6%
168216 220.1.1.151 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MRCK 0.56 42.0 3.62e-01 83.1% 83.8%
3572708 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 41.0 3.59e-01 81.7% 68.7%
3627951 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 41.0 3.80e-01 83.1% 92.6%
3199835 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 40.0 3.99e-01 81.7% 93.3%
4262943 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.54 40.0 3.43e-01 81.7% 76.0%
3898198 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.54 40.0 3.43e-01 83.1% 76.0%
3718060 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 39.0 3.43e-01 81.7% 76.5%
3652009 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 39.0 3.32e-01 81.7% 79.2%
3737483 220.1.1.70 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 0.52 38.0 3.03e-01 81.7% 67.6%
3586913 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 41.0 3.70e-01 90.1% 72.4%
3732987 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 38.0 3.29e-01 81.7% 68.8%
3845291 220.1.1.119 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Syntrophin_4th 0.52 39.0 2.81e-01 81.7% 41.3%
3700459 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 38.0 3.06e-01 78.9% 53.3%
3874298 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 38.0 3.11e-01 81.7% 74.2%
3247934 1.1.7.41 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.51 44.0 4.04e-01 98.6% 100.0%
4085589 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.51 44.0 4.25e-01 97.2% 97.5%
3219683 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.51 37.0 3.12e-01 81.7% 65.0%
4301851 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 38.0 3.15e-01 83.1% 69.3%
3265308 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 37.0 3.02e-01 81.7% 62.6%
3939762 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 37.0 3.30e-01 81.7% 80.0%