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IMGVR_UViG_3300025159_000758-3300025159-Ga0209619_1001721712

Arc-Vir

IMGVR_UViG_3300025159_000758-3300025159-Ga0209619_1001721712

Identity

Kingdom:
archaea

Quality

95.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-52_114-141
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6muwK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.82 76.0 5.59e-01 100.0% 67.7%
4fk5A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 39.0 2.57e-01 75.0% 29.0%
5cqgA04 3.30.70.2630 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 39.0 3.67e-01 80.0% 95.3%
5u3fB01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.53 41.0 3.48e-01 100.0% 49.3%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 41.0 3.52e-01 83.7% 94.4%
6nu7A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 43.0 2.95e-01 100.0% 71.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4108185 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.84 79.0 5.95e-01 100.0% 70.9%
5057849 210.1.1.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits 0.80 74.0 5.34e-01 100.0% 63.4%
4074315 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.51 44.0 3.45e-01 96.2% 77.1%
3258692 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.50 42.0 3.63e-01 100.0% 86.8%
D2 medium residues 53-113
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.28e-01 80.3% 91.5%
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.60 42.0 3.07e-01 75.4% 86.7%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 37.0 3.69e-01 100.0% 61.5%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 36.0 3.57e-01 100.0% 59.7%
2b3tA01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.56 40.0 3.66e-01 77.0% 66.7%
3l8nA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.55 37.0 3.44e-01 98.4% 55.3%
1in4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 35.0 3.31e-01 100.0% 54.8%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.10e-01 98.4% 95.4%
3cjhI00 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.54 37.0 3.92e-01 72.1% 83.3%
3pw3D00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 41.0 2.62e-01 90.2% 41.6%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.41e-01 96.7% 58.3%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5049894 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 46.0 4.70e-01 100.0% 68.3%
3617979 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 48.0 4.53e-01 100.0% 61.3%
5060609 632.8.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.66 48.0 4.50e-01 77.0% 88.0%
3400504 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.66 41.0 3.59e-01 100.0% 41.1%
5010061 101.1.2.87 ↗ alpha arrays › HTH › HTH › winged helix domain › PaaX 0.64 45.0 4.15e-01 98.4% 57.5%
5077611 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 42.0 3.35e-01 98.4% 34.4%
3224878 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.61 41.0 3.61e-01 100.0% 46.7%
3924998 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.61 46.0 2.88e-01 83.6% 34.4%
3580494 101.1.2.499 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_MCM7 0.61 41.0 3.94e-01 98.4% 61.4%
3371382 109.4.1.443 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MOR2-PAG1_C 0.59 46.0 3.49e-01 93.4% 92.0%
3928877 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.58 41.0 3.66e-01 100.0% 51.1%
3576188 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.58 38.0 3.42e-01 100.0% 46.7%
5017266 5058.1.1.0 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.57 47.0 4.33e-01 93.4% 98.8%
3491271 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.55 39.0 3.54e-01 100.0% 55.3%
3798291 101.1.15.0 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.54 38.0 3.50e-01 100.0% 53.3%
4012689 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 46.0 3.68e-01 95.1% 73.3%
4522664 2002.1.1.8 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase 0.53 45.0 2.71e-01 95.1% 80.6%
3972365 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 46.0 3.29e-01 98.4% 91.9%
5035687 101.1.2.948 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27297 0.52 43.0 3.70e-01 95.1% 71.4%
4397445 109.4.1.317 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med5 0.50 40.0 2.48e-01 90.2% 24.8%
D3 medium residues 142-195
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e94A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.94 80.0 5.39e-01 100.0% 28.2%
4mspB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.81 59.0 5.29e-01 77.8% 56.0%
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.78 66.0 5.86e-01 98.1% 81.0%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.75 64.0 5.79e-01 98.1% 94.7%
3u9rB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.75 56.0 3.61e-01 83.3% 73.4%
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.74 54.0 5.07e-01 79.6% 69.1%
3nufB00 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.72 54.0 4.29e-01 79.6% 41.1%
2ymmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.72 60.0 5.54e-01 100.0% 80.8%
1cvrA02 3.40.50.1460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 62.0 4.08e-01 100.0% 25.1%
1knzA01 6.10.280.20 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rotavirus non-structural protein NSP3, N-terminal domain 0.71 51.0 4.24e-01 79.6% 48.0%
6fakA01 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.71 60.0 5.01e-01 96.3% 73.7%
1yt3A03 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.71 55.0 4.88e-01 87.0% 59.8%
4oogC01 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.70 51.0 3.60e-01 77.8% 53.7%
2w43A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.70 58.0 5.72e-01 96.3% 96.5%
3zvkA00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.70 48.0 3.65e-01 75.9% 29.9%
3o60A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 50.0 3.55e-01 79.6% 24.7%
1hlvA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 55.0 5.40e-01 96.3% 81.7%
4uqfG01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.69 49.0 5.04e-01 79.6% 88.5%
1a8rA01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.68 51.0 4.48e-01 83.3% 62.4%
3tndA00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.68 47.0 3.59e-01 72.2% 29.5%
4evxA00 1.10.1740.240 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.67 50.0 4.14e-01 81.5% 63.9%
1is8A01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.66 48.0 4.74e-01 81.5% 81.7%
3mzoB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.65 52.0 3.50e-01 90.7% 43.3%
3lynB00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.64 53.0 4.17e-01 96.3% 87.1%
2reoA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 43.0 2.93e-01 70.4% 18.4%
2ncoA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.63 53.0 4.34e-01 100.0% 51.0%
4akgA08 1.10.472.130 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain 0.63 52.0 3.79e-01 94.4% 78.2%
2yz0A00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.62 45.0 3.44e-01 81.5% 31.2%
2qgsB01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.61 52.0 4.52e-01 100.0% 64.8%
3rnlA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 45.0 2.95e-01 81.5% 87.4%
2b3fC02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 52.0 3.51e-01 100.0% 72.5%
2be4A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 48.0 4.01e-01 100.0% 55.4%
3dkqA02 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.57 43.0 4.61e-01 92.6% 93.6%
1zs3A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 46.0 3.33e-01 94.4% 72.5%
2ph5A02 3.30.360.30 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › homospermidine synthase like 0.56 46.0 2.95e-01 92.6% 49.3%
1lm3B00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.56 44.0 3.56e-01 87.0% 59.4%
3kyiA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.56 50.0 3.77e-01 100.0% 84.4%
3s63A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.56 46.0 3.95e-01 92.6% 94.3%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.55 43.0 3.41e-01 98.1% 71.1%
4i9cA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 44.0 2.91e-01 87.0% 98.6%
2yqyA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.55 41.0 3.10e-01 79.6% 68.3%
1l5jA03 3.40.1060.10 Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 0.55 43.0 3.00e-01 87.0% 26.6%
7bqiA01 1.20.58.900 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain 0.55 49.0 3.56e-01 100.0% 77.5%
1e7lA02 1.10.720.10 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.54 41.0 4.13e-01 83.3% 98.2%
4csrB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.54 42.0 3.74e-01 98.1% 57.3%
2pybA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 40.0 3.08e-01 87.0% 82.1%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.54 42.0 4.05e-01 85.2% 77.0%
1qd1B02 3.30.70.670 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain 0.54 46.0 3.46e-01 100.0% 97.2%
4adnA01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.53 47.0 4.03e-01 98.1% 63.5%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.53 46.0 3.28e-01 100.0% 91.3%
2xevB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 42.0 3.28e-01 92.6% 41.9%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 42.0 3.02e-01 90.7% 78.7%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3270778 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.93 70.0 5.55e-01 79.6% 44.0%
4024241 4979.2.1.1 ↗ alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD 0.87 65.0 5.68e-01 79.6% 57.7%
3966542 2486.1.1.0 ↗ a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase 0.85 64.0 3.97e-01 79.6% 16.0%
3185674 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.84 73.0 4.41e-01 92.6% 34.5%
3686904 2486.1.1.3 ↗ a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans 0.84 63.0 4.17e-01 79.6% 22.1%
4619869 148.1.3.351 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Peptidase_U4 0.84 62.0 5.01e-01 79.6% 44.0%
3732977 2486.1.1.3 ↗ a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans 0.82 63.0 3.55e-01 81.5% 35.2%
3164721 1078.1.1.0 ↗ extended segments › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit 0.81 60.0 5.04e-01 79.6% 52.2%
3962576 148.1.1.0 ↗ alpha arrays › Histone-like › Histone-related › Histone 0.81 69.0 5.94e-01 94.4% 68.7%
3481731 148.1.1.18 ↗ alpha arrays › Histone-like › Histone-related › Histone › CENP-S 0.80 59.0 4.89e-01 79.6% 46.3%
4305197 1197.1.1.1 ↗ alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf 0.80 70.0 4.71e-01 98.1% 39.0%
3327321 3843.1.1.0 ↗ alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.79 65.0 5.54e-01 92.6% 65.6%
3673805 148.1.3.285 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cyclin_C 0.79 59.0 5.01e-01 79.6% 52.9%
4353063 621.1.1.3 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB 0.78 57.0 4.10e-01 79.6% 29.4%
3949317 162.1.1.0 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD 0.77 59.0 4.75e-01 83.3% 46.7%
3398509 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.77 68.0 4.23e-01 100.0% 57.3%
5082532 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.77 56.0 5.13e-01 75.9% 60.0%
3945729 604.32.1.0 ↗ alpha bundles › Spectrin repeat-like › Recombination protein uvsY › Recombination protein uvsY 0.77 58.0 4.41e-01 83.3% 37.7%
3209229 3877.1.1.1 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP 0.76 67.0 4.20e-01 96.3% 52.9%
3608416 4336.2.1.0 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 0.75 57.0 4.96e-01 83.3% 63.5%
3263465 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.75 53.0 4.69e-01 75.9% 51.2%
3643488 192.15.1.11 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CemA 0.74 54.0 4.86e-01 77.8% 56.0%
3242817 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.74 66.0 4.20e-01 100.0% 36.9%
2776079 3787.1.1.0 ↗ alpha bundles › HAD superfamily helical bundle insertion domain 0.74 62.0 6.13e-01 96.3% 98.2%
4046347 7575.1.1.2 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C25 0.73 66.0 4.33e-01 100.0% 27.4%
3487231 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.72 52.0 3.61e-01 77.8% 77.8%
3897328 2003.1.5.111 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Rsm22 0.71 54.0 3.32e-01 83.3% 14.3%
2075033 3787.1.1.0 ↗ alpha bundles › HAD superfamily helical bundle insertion domain 0.71 60.0 5.37e-01 98.1% 89.9%
3797352 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.71 60.0 4.42e-01 98.1% 67.3%
4241417 219.1.1.21 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.71 61.0 4.02e-01 100.0% 79.1%
7720 4060.1.1.1 ↗ a+b duplicates or obligate multimers › NSP3 homodimer › NSP3 homodimer › NSP3 homodimer › Rota_NSP3 0.71 51.0 3.75e-01 79.6% 31.8%
3404120 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.71 56.0 4.11e-01 88.9% 81.4%
3615716 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 50.0 3.89e-01 75.9% 65.0%
3509156 101.1.2.352 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 0.70 59.0 5.50e-01 100.0% 84.3%
5074335 633.4.1.0 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor 0.69 55.0 4.52e-01 92.6% 71.6%
3239799 148.1.1.0 ↗ alpha arrays › Histone-like › Histone-related › Histone 0.69 52.0 3.56e-01 81.5% 25.3%
5000270 3646.1.1.0 ↗ alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters 0.69 50.0 3.37e-01 79.6% 24.1%
3592370 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.68 52.0 4.06e-01 83.3% 64.2%
3226591 5054.1.1.0 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.68 55.0 4.14e-01 92.6% 80.7%
5000181 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.68 55.0 4.49e-01 94.4% 48.2%
5060007 5059.1.1.1 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.67 46.0 3.41e-01 72.2% 28.9%
5027220 5041.1.1.0 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.67 51.0 4.95e-01 85.2% 75.0%
3724838 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.66 47.0 4.36e-01 75.9% 85.7%
3637597 109.4.1.70 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID 0.64 46.0 3.02e-01 75.9% 26.2%
3326759 284.1.3.1 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 0.64 46.0 4.20e-01 77.8% 56.0%
4953164 103.5.1.0 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like 0.64 43.0 4.30e-01 77.8% 69.1%
4329065 4953.1.1.0 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.62 52.0 4.62e-01 100.0% 83.5%
3709879 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.61 44.0 4.05e-01 79.6% 56.0%
3704289 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.61 47.0 4.28e-01 88.9% 67.5%
4952657 103.5.1.4 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › HCS_D2 0.60 40.0 3.96e-01 70.4% 61.7%
5032850 1076.1.1.1 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like 0.60 50.0 3.30e-01 100.0% 80.8%
4084096 316.1.1.60 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2, DUF294 0.60 53.0 3.85e-01 100.0% 69.3%
4642209 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.59 52.0 3.79e-01 98.1% 69.3%
3973900 192.8.1.331 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF4824 0.58 45.0 3.85e-01 83.3% 62.4%
3518379 3502.1.1.1 ↗ alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG 0.58 39.0 3.94e-01 75.9% 70.9%
3562133 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 48.0 2.98e-01 100.0% 36.8%
5057991 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 4.42e-01 100.0% 90.0%
3202914 3846.1.1.0 ↗ alpha bundles › IcmR › IcmR › IcmR 0.56 46.0 4.47e-01 90.7% 91.7%
2494216 5059.1.1.4 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Nuc_sug_transp 0.51 45.0 3.18e-01 100.0% 99.4%
3832084 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.50 42.0 3.86e-01 96.3% 96.0%