Back to structures

IMGVR_UViG_3300025159_000758-3300025159-Ga0209619_100172173

Arc-Vir

IMGVR_UViG_3300025159_000758-3300025159-Ga0209619_100172173

Quality

84.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 36-94
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4w4tB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 43.0 2.73e-01 86.4% 29.3%
2b7jB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 45.0 3.32e-01 86.4% 53.3%
6uf3A00 3.40.630.190 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein 0.52 44.0 2.99e-01 100.0% 80.7%
7ahbB01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.51 38.0 3.88e-01 83.1% 100.0%
2kxeA00 1.10.8.800 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › D-family DNA polymerase, DP1 subunit N-terminal domain 0.50 37.0 3.51e-01 79.7% 70.8%
3gudA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 35.0 2.85e-01 74.6% 75.6%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5063713 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.57 40.0 4.05e-01 74.6% 88.3%
3998280 316.1.1.1 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol 0.56 42.0 3.65e-01 81.4% 86.3%
3211850 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.52 32.0 3.12e-01 79.7% 55.4%