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IMGVR_UViG_3300025163_000063-3300025163-Ga0209410_100050829
Arc-VirIMGVR_UViG_3300025163_000063-3300025163-Ga0209410_100050829
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-137
Domain cluster:
rep: NC_074655__YP_010772789.1__QIT52-gp32__00032__D1-135
D2
medium
residues 138-212
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4u04B01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 53.0 | 5.01e-01 | 72.0% | 61.4% |
| 7qihA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.75 | 52.0 | 4.66e-01 | 73.3% | 53.5% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.75 | 51.0 | 4.64e-01 | 70.7% | 80.8% |
| 4gywA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.74 | 51.0 | 4.41e-01 | 76.0% | 47.7% |
| 2xgsB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 53.0 | 5.43e-01 | 86.7% | 78.1% |
| 1elwA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 54.0 | 4.58e-01 | 77.3% | 49.6% |
| 5djsA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 54.0 | 4.27e-01 | 77.3% | 40.6% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.73 | 50.0 | 4.10e-01 | 70.7% | 57.1% |
| 8amzP01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.72 | 65.0 | 4.09e-01 | 100.0% | 21.1% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.71 | 49.0 | 4.74e-01 | 70.7% | 73.5% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.71 | 58.0 | 5.29e-01 | 90.7% | 74.3% |
| 3qdnA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 52.0 | 5.03e-01 | 81.3% | 69.0% |
| 5fzsA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 52.0 | 4.58e-01 | 77.3% | 54.2% |
| 1a17A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 52.0 | 4.03e-01 | 77.3% | 36.5% |
| 4gywA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 51.0 | 4.58e-01 | 77.3% | 55.2% |
| 3urzA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.69 | 57.0 | 4.25e-01 | 100.0% | 34.7% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.69 | 47.0 | 4.45e-01 | 72.0% | 87.9% |
| 6fdpA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 49.0 | 4.24e-01 | 77.3% | 48.3% |
| 2oyoA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.67 | 53.0 | 4.38e-01 | 82.7% | 97.6% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.67 | 52.0 | 4.23e-01 | 82.7% | 77.0% |
| 2qeuB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.66 | 56.0 | 4.69e-01 | 94.7% | 57.9% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.65 | 45.0 | 4.10e-01 | 72.0% | 56.0% |
| 1e8yA03 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.64 | 50.0 | 3.85e-01 | 86.7% | 37.6% |
| 1wolA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.64 | 46.0 | 3.85e-01 | 100.0% | 45.9% |
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.64 | 47.0 | 4.17e-01 | 78.7% | 67.3% |
| 4jhrB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 53.0 | 3.69e-01 | 98.7% | 53.3% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.63 | 48.0 | 3.13e-01 | 82.7% | 77.4% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 49.0 | 4.10e-01 | 84.0% | 70.5% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.63 | 50.0 | 4.47e-01 | 89.3% | 61.6% |
| 2ggfA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 53.0 | 4.39e-01 | 94.7% | 89.8% |
| 2q24A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 53.0 | 4.18e-01 | 100.0% | 81.5% |
| 2genA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 46.0 | 3.52e-01 | 81.3% | 70.2% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.61 | 51.0 | 4.74e-01 | 97.3% | 82.0% |
| 2r5sA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 50.0 | 4.85e-01 | 100.0% | 83.0% |
| 6adqG01 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.60 | 46.0 | 3.50e-01 | 82.7% | 55.6% |
| 2yjkC00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 44.0 | 3.56e-01 | 81.3% | 91.1% |
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.59 | 51.0 | 3.38e-01 | 100.0% | 77.7% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 50.0 | 4.08e-01 | 94.7% | 70.3% |
| 3gziA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 44.0 | 3.33e-01 | 82.7% | 58.6% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 49.0 | 3.94e-01 | 97.3% | 46.8% |
| 4cybD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 47.0 | 3.60e-01 | 90.7% | 80.7% |
| 4xpwA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.55 | 48.0 | 4.00e-01 | 97.3% | 71.8% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.53 | 42.0 | 4.22e-01 | 89.3% | 98.6% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.52 | 43.0 | 3.56e-01 | 90.7% | 72.2% |
| 3lcvB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 46.0 | 3.35e-01 | 100.0% | 94.6% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5056502 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.88 | 80.0 | 4.83e-01 | 100.0% | 18.9% |
| 5029365 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.86 | 79.0 | 4.99e-01 | 100.0% | 22.6% |
| 4979951 | 3352.1.1.15 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › GT87 | 0.85 | 78.0 | 4.88e-01 | 100.0% | 22.2% |
| 5057640 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.83 | 78.0 | 4.74e-01 | 100.0% | 21.7% |
| 5014124 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.81 | 75.0 | 4.79e-01 | 100.0% | 27.0% |
| 4997415 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.80 | 57.0 | 4.52e-01 | 73.3% | 94.3% |
| 5027837 | 3352.1.1.15 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › GT87 | 0.79 | 71.0 | 4.60e-01 | 100.0% | 24.9% |
| 3393707 | 3352.1.1.21 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DIE2_ALG10 | 0.77 | 66.0 | 4.19e-01 | 100.0% | 20.0% |
| 5056667 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.77 | 72.0 | 4.34e-01 | 100.0% | 19.8% |
| 3406661 | 3352.1.1.25 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PIG-U | 0.74 | 68.0 | 4.32e-01 | 98.7% | 26.5% |
| 3936379 | 3352.1.1.25 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PIG-U | 0.74 | 67.0 | 4.35e-01 | 100.0% | 26.7% |
| 3462230 | 3352.1.1.21 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DIE2_ALG10 | 0.73 | 63.0 | 4.13e-01 | 100.0% | 21.8% |
| 3531822 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.72 | 53.0 | 4.04e-01 | 77.3% | 35.2% |
| 3390887 | 109.4.1.1347 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16, TPR_19 | 0.72 | 53.0 | 3.93e-01 | 77.3% | 32.2% |
| 5022031 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.72 | 54.0 | 4.95e-01 | 78.7% | 69.5% |
| 5048888 | 109.4.1.195 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 | 0.70 | 52.0 | 4.76e-01 | 77.3% | 61.1% |
| 3189274 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.70 | 56.0 | 4.52e-01 | 88.0% | 52.4% |
| 4134971 | 603.1.1.225 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, PF26585 | 0.70 | 53.0 | 4.00e-01 | 82.7% | 74.6% |
| 3714029 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.68 | 53.0 | 3.92e-01 | 84.0% | 46.8% |
| 3960314 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.68 | 56.0 | 4.87e-01 | 90.7% | 65.2% |
| 3699309 | 109.4.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI3Ka | 0.67 | 51.0 | 4.01e-01 | 84.0% | 40.0% |
| 3227 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.67 | 55.0 | 4.85e-01 | 94.7% | 63.2% |
| 3970091 | 3883.1.1.0 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain | 0.65 | 60.0 | 4.19e-01 | 100.0% | 91.1% |
| 3615307 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 48.0 | 4.48e-01 | 81.3% | 85.3% |
| 3275536 | 109.4.1.1573 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29376 | 0.64 | 55.0 | 3.30e-01 | 100.0% | 49.7% |
| 4009332 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.64 | 54.0 | 3.41e-01 | 98.7% | 23.0% |
| 3403154 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 53.0 | 3.20e-01 | 97.3% | 14.5% |
| 3387290 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 53.0 | 3.88e-01 | 98.7% | 62.2% |
| 3414696 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.62 | 48.0 | 3.57e-01 | 86.7% | 31.0% |
| 5076342 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.62 | 47.0 | 4.32e-01 | 84.0% | 66.0% |
| 5009867 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.61 | 46.0 | 4.04e-01 | 100.0% | 54.5% |
| 3901398 | 109.4.1.31 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3 | 0.61 | 53.0 | 3.94e-01 | 100.0% | 42.9% |
| 4985507 | 604.10.1.0 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac | 0.61 | 52.0 | 4.89e-01 | 94.7% | 95.6% |
| 5044963 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 47.0 | 3.87e-01 | 84.0% | 65.0% |
| 3815122 | 604.12.1.68 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF6857 | 0.61 | 53.0 | 4.07e-01 | 100.0% | 61.7% |
| 4003951 | 145.1.1.48 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › ARM_FBXO47 | 0.60 | 53.0 | 3.44e-01 | 100.0% | 31.9% |
| 3166901 | 109.4.1.72 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C | 0.60 | 52.0 | 3.30e-01 | 100.0% | 18.3% |
| 3609269 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.60 | 49.0 | 5.07e-01 | 93.3% | 100.0% |
| 3592454 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 48.0 | 4.10e-01 | 100.0% | 58.5% |
| 4986387 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.54 | 46.0 | 3.67e-01 | 100.0% | 48.3% |
| 5041344 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.53 | 46.0 | 3.79e-01 | 100.0% | 53.9% |
| 4948968 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.53 | 43.0 | 4.15e-01 | 92.0% | 83.5% |
D3
medium
residues 213-274