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IMGVR_UViG_3300025164_001577-3300025164-Ga0209521_1000361911

Arc-Vir

IMGVR_UViG_3300025164_001577-3300025164-Ga0209521_1000361911

Quality

90.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 46-153
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dkxA02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.74 53.0 6.03e-01 94.4% 100.0%
1u00A02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.73 58.0 6.05e-01 99.1% 94.8%
3x3bA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.72 62.0 4.63e-01 93.5% 91.5%
3p42A02 6.10.250.2280 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.72 37.0 4.51e-01 84.3% 77.1%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.72 52.0 5.72e-01 86.1% 94.3%
4im0A04 1.20.1270.420 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.70 62.0 4.82e-01 97.2% 86.6%
1tqgA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.69 48.0 4.86e-01 88.9% 72.4%
3rguB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.69 53.0 5.82e-01 88.0% 100.0%
3cazB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.69 58.0 4.69e-01 92.6% 88.6%
3hwcA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.68 61.0 4.90e-01 98.1% 53.3%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.66 57.0 4.43e-01 93.5% 82.3%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.66 58.0 5.34e-01 94.4% 100.0%
4cybD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 53.0 4.62e-01 91.7% 87.7%
1st6A01 1.20.120.810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle 0.64 52.0 3.97e-01 88.9% 39.6%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.63 44.0 4.70e-01 85.2% 83.0%
7utzR02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.63 53.0 3.96e-01 92.6% 97.8%
4zudA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.63 49.0 3.69e-01 82.4% 98.8%
5unhA02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.62 52.0 3.91e-01 91.7% 97.8%
2vxxA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.62 52.0 4.50e-01 92.6% 87.8%
1zymA02 1.10.274.10 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain 0.61 47.0 4.55e-01 83.3% 83.3%
4nwpD00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.61 53.0 4.75e-01 95.4% 98.0%
1zs3A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.61 51.0 4.39e-01 91.7% 87.1%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.59 43.0 4.04e-01 76.9% 70.7%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 40.0 3.38e-01 70.4% 56.3%
3frrA00 1.20.1260.60 Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 0.58 42.0 3.57e-01 76.9% 54.8%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.56 30.0 3.43e-01 91.7% 68.4%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.74e-01 77.8% 82.0%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.88e-01 79.6% 77.5%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.77e-01 76.9% 80.1%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 44.0 3.98e-01 88.9% 78.1%
1s7hA02 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 35.0 3.89e-01 87.0% 85.4%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.58e-01 74.1% 80.1%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.72e-01 75.0% 86.6%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.66e-01 76.9% 77.9%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.61e-01 77.8% 79.7%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.52e-01 78.7% 72.2%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.49e-01 75.0% 80.1%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 3.55e-01 93.5% 70.0%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.54e-01 78.7% 80.3%
2oarB00 1.10.1200.120 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 0.51 36.0 3.46e-01 79.6% 63.2%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5053994 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.86 59.0 6.96e-01 88.0% 100.0%
3235853 632.6.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit 0.85 61.0 6.97e-01 87.0% 100.0%
5044025 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.80 61.0 6.77e-01 88.0% 100.0%
3241303 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.80 57.0 6.51e-01 87.0% 98.8%
4886450 511.1.1.1 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.80 57.0 6.44e-01 91.7% 100.0%
4385343 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.79 56.0 6.40e-01 91.7% 100.0%
4679869 632.15.1.4 alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 0.78 58.0 6.41e-01 95.4% 98.8%
4591251 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.77 58.0 6.40e-01 95.4% 98.8%
4365553 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.77 60.0 6.48e-01 99.1% 98.9%
4360723 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.76 59.0 6.35e-01 99.1% 97.8%
5028461 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.76 60.0 6.49e-01 99.1% 100.0%
4044489 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.76 57.0 6.29e-01 97.2% 100.0%
4263879 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.75 60.0 5.92e-01 98.1% 80.0%
3171735 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.74 59.0 6.23e-01 96.3% 94.7%
4322565 632.15.1.4 alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 0.74 55.0 6.08e-01 98.1% 98.8%
4365789 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.74 58.0 6.29e-01 98.1% 100.0%
3273890 632.7.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.74 57.0 6.21e-01 96.3% 97.8%
3924462 632.1.1.11 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › HYOU1_C 0.71 62.0 6.00e-01 92.6% 85.0%
4494025 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.70 57.0 5.80e-01 86.1% 91.4%
3783776 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.70 57.0 6.04e-01 99.1% 100.0%
4022294 1025.1.1.0 alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain 0.69 58.0 5.88e-01 90.7% 100.0%
4023291 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.67 56.0 5.83e-01 100.0% 99.0%
3404460 5001.1.1.111 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1, 7TM_GPCR_Srw 0.66 49.0 3.31e-01 77.8% 25.4%
3804981 192.29.1.7 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › TMEM192 0.65 55.0 4.94e-01 93.5% 72.3%
3693835 601.1.1.90 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF3433 0.64 54.0 4.70e-01 92.6% 79.4%
3777845 633.23.1.17 alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA 0.63 55.0 4.19e-01 97.2% 70.6%
3214549 5001.1.1.16 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srt 0.63 56.0 4.05e-01 100.0% 88.1%
3908755 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.63 53.0 3.84e-01 94.4% 88.0%
3410814 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.62 50.0 4.79e-01 94.4% 76.0%
3221030 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.61 52.0 3.92e-01 97.2% 98.6%
4676063 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.59 51.0 3.73e-01 100.0% 60.6%
3588306 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.59 43.0 3.95e-01 75.9% 80.0%
3900979 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.58 51.0 3.72e-01 100.0% 40.9%
4957734 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.56 40.0 3.69e-01 74.1% 79.3%
4031872 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.56 40.0 3.69e-01 75.0% 75.2%
2589 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.56 41.0 3.78e-01 76.9% 80.7%
3289932 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.56 42.0 3.83e-01 78.7% 80.0%
3469701 3755.1.1.0 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.55 44.0 3.50e-01 86.1% 91.2%
4033334 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.55 40.0 3.65e-01 75.9% 75.2%
3263653 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.55 43.0 3.84e-01 87.0% 77.0%
4952992 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.55 39.0 3.51e-01 73.1% 74.0%
4957731 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.54 39.0 3.52e-01 74.1% 74.7%
5018368 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.54 39.0 3.43e-01 75.0% 73.1%
3945846 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.54 40.0 3.68e-01 77.8% 79.7%
3291221 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.53 40.0 3.70e-01 78.7% 80.7%
5024808 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.52 38.0 3.47e-01 75.0% 75.9%
3287015 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.52 40.0 3.68e-01 80.6% 76.4%
4605893 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.52 38.0 3.52e-01 75.9% 79.3%
3966164 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.52 38.0 3.46e-01 75.9% 77.9%
None 0.52 39.0 4.20e-01 93.5% 94.4%
5004617 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.52 35.0 3.27e-01 70.4% 88.3%
3280001 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.51 37.0 3.29e-01 74.1% 71.0%
4054247 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.51 37.0 3.35e-01 75.0% 75.3%
3956277 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.51 37.0 3.44e-01 75.9% 74.1%
3945077 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.51 37.0 3.43e-01 77.8% 76.4%
3943815 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.51 37.0 3.45e-01 75.9% 80.0%
5077445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 37.0 3.37e-01 78.7% 97.4%
4132207 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.50 36.0 3.32e-01 75.0% 80.7%