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IMGVR_UViG_3300025167_000462-3300025167-Ga0209642_100145508
Arc-VirIMGVR_UViG_3300025167_000462-3300025167-Ga0209642_100145508
Identity
- Kingdom:
- archaea
Quality
86.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-107
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 64.0 | 4.88e-01 | 81.3% | 58.5% |
| 3c1yA02 | 1.20.1260.110 | Mainly Alpha › Up-down Bundle › Ferritin › DNA integrity scanning linker region | 0.69 | 51.0 | 4.53e-01 | 75.7% | 96.6% |
| 3uonA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.65 | 45.0 | 3.35e-01 | 72.0% | 71.3% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.62 | 43.0 | 4.19e-01 | 71.0% | 68.3% |
| 3wfwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 35.0 | 3.21e-01 | 80.4% | 42.0% |
| 2icwG01 | 1.20.120.390 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hla class ii histocompatibility antigen, dr alpha chain. Chain D, domain 1 | 0.60 | 42.0 | 4.02e-01 | 72.0% | 67.7% |
| 1ui6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 42.0 | 3.51e-01 | 82.2% | 71.9% |
| 3b8mC02 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 37.0 | 3.79e-01 | 71.0% | 77.9% |
| 4me9B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 41.0 | 3.49e-01 | 83.2% | 81.2% |
| 4ysxC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.50 | 35.0 | 3.16e-01 | 72.0% | 85.0% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4001683 | 109.4.1.1504 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26103 | 0.77 | 53.0 | 3.30e-01 | 70.1% | 14.0% |
| 2774528 | 3286.1.1.1 ↗ | alpha complex topology › Glypican insertion domain › Glypican insertion domain › Glypican insertion domain › Glypican | 0.74 | 55.0 | 4.91e-01 | 77.6% | 56.2% |
| 4993207 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.74 | 54.0 | 4.88e-01 | 81.3% | 57.1% |
| 2711996 | 6168.1.1.1 ↗ | alpha duplicates or obligate multimers › Immediate-early 1 protein › Immediate-early 1 protein › Immediate-early 1 protein › Herpes_IE1 | 0.71 | 64.0 | 4.42e-01 | 98.1% | 32.1% |
| 3814336 | 603.2.1.13 ↗ | alpha bundles › STAT-like › STAT › STAT › NET2A_C | 0.69 | 47.0 | 4.13e-01 | 73.8% | 47.7% |
| 3944006 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.68 | 50.0 | 4.74e-01 | 76.6% | 68.0% |
| 3973579 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.67 | 46.0 | 3.63e-01 | 71.0% | 73.6% |
| 4010416 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 49.0 | 4.69e-01 | 77.6% | 68.0% |
| 3695084 | 5069.1.1.6 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › COX15-CtaA | 0.65 | 47.0 | 3.34e-01 | 74.8% | 52.1% |
| 3597529 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.63 | 44.0 | 4.00e-01 | 72.0% | 71.4% |
| 3257271 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.63 | 37.0 | 3.98e-01 | 73.8% | 67.4% |
| 3799089 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.62 | 54.0 | 3.44e-01 | 97.2% | 76.1% |
| 3967784 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.61 | 44.0 | 4.07e-01 | 76.6% | 100.0% |
| 3630036 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.61 | 42.0 | 3.37e-01 | 71.0% | 69.3% |
| 3265198 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.60 | 54.0 | 3.37e-01 | 99.1% | 51.1% |
| 4595581 | 101.10.1.0 ↗ | alpha arrays › HTH › Hypothetical protein YhaI › Hypothetical protein YhaI | 0.59 | 41.0 | 3.98e-01 | 72.0% | 87.5% |
| 3829291 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.56 | 40.0 | 2.61e-01 | 84.1% | 16.8% |
| 3740313 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.55 | 44.0 | 3.42e-01 | 83.2% | 53.6% |
| 3484510 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.55 | 47.0 | 2.98e-01 | 97.2% | 85.8% |
| 3575986 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.55 | 38.0 | 3.19e-01 | 70.1% | 46.8% |
| 4955210 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 39.0 | 2.89e-01 | 74.8% | 28.7% |
| 4094 | 191.1.1.16 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_12 | 0.53 | 37.0 | 3.63e-01 | 72.9% | 68.6% |
| 3938074 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.52 | 37.0 | 2.94e-01 | 72.9% | 75.6% |
| 3202941 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.52 | 36.0 | 3.54e-01 | 72.0% | 73.9% |
| 4954771 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.51 | 35.0 | 3.02e-01 | 72.0% | 88.2% |
| 1171131 | 191.1.1.11 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_7 | 0.50 | 35.0 | 3.36e-01 | 72.9% | 74.0% |