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IMGVR_UViG_3300025174_000089-3300025174-Ga0209324_1000045745
Arc-VirIMGVR_UViG_3300025174_000089-3300025174-Ga0209324_1000045745
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-170
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00102.33 best | Y_phosphatase | 29.7 | 7.00e-07 | 63.2% | 26.9% |
| PF22784.2 | PTP-SAK | 29.9 | 7.40e-07 | 42.1% | 20.9% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r0bA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.72 | 54.0 | 5.48e-01 | 100.0% | 78.1% |
| 1fpzC00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.63 | 55.0 | 5.20e-01 | 100.0% | 78.7% |
| 7q1bA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.62 | 56.0 | 4.24e-01 | 99.3% | 98.1% |
| 5g0xA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.62 | 56.0 | 4.24e-01 | 99.3% | 89.7% |
| 3q71A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.61 | 53.0 | 4.87e-01 | 95.4% | 100.0% |
| 3menB00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.61 | 52.0 | 4.06e-01 | 94.1% | 98.0% |
| 4d86A01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.60 | 52.0 | 4.87e-01 | 94.1% | 100.0% |
| 5ailA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.60 | 53.0 | 5.00e-01 | 96.1% | 99.4% |
| 3q9cA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.59 | 51.0 | 4.00e-01 | 94.7% | 99.4% |
| 4iqyB00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.59 | 52.0 | 4.59e-01 | 95.4% | 86.8% |
| 1c3pA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.59 | 52.0 | 4.01e-01 | 100.0% | 59.1% |
| 1ghhA00 | 3.30.910.10 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › DinI-like | 0.58 | 22.0 | 3.01e-01 | 83.6% | 63.0% |
| 3zmrB02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 49.0 | 3.69e-01 | 90.8% | 92.6% |
| 3ajeA02 | 3.40.50.11030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Threonylcarbamoyl-AMP synthase, C-terminal domain | 0.57 | 38.0 | 4.22e-01 | 92.8% | 86.2% |
| 2b4oA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 51.0 | 4.46e-01 | 100.0% | 65.9% |
| 4jmjA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 53.0 | 4.99e-01 | 100.0% | 88.4% |
| 2esbA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 53.0 | 5.25e-01 | 100.0% | 97.5% |
| 3kqxL01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.56 | 47.0 | 4.45e-01 | 91.4% | 92.6% |
| 1yn9B00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 53.0 | 5.09e-01 | 100.0% | 92.3% |
| 3v2bA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.56 | 49.0 | 4.71e-01 | 95.4% | 97.2% |
| 4ydsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 49.0 | 4.32e-01 | 96.1% | 76.5% |
| 2higB03 | 3.40.50.460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphofructokinase domain | 0.55 | 41.0 | 4.11e-01 | 75.7% | 80.1% |
| 3u37A02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.54 | 41.0 | 3.51e-01 | 80.3% | 76.6% |
| 3itlD00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.53 | 47.0 | 3.48e-01 | 97.4% | 85.4% |
| 3tc3B00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.53 | 42.0 | 3.46e-01 | 84.2% | 56.9% |
| 3bs4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 3.92e-01 | 100.0% | 90.6% |
| 4c0hA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 44.0 | 3.85e-01 | 96.7% | 84.3% |
| 3n2oA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.50 | 43.0 | 3.59e-01 | 95.4% | 89.0% |
| 1knwA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.50 | 41.0 | 3.55e-01 | 88.2% | 88.6% |
| 2yn0A00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.50 | 44.0 | 3.78e-01 | 96.1% | 78.2% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3713741 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.66 | 56.0 | 5.36e-01 | 100.0% | 78.3% |
| 4886704 | 2004.1.1.761 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PapZ_C | 0.66 | 48.0 | 5.43e-01 | 92.1% | 95.8% |
| 5051329 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.64 | 57.0 | 4.26e-01 | 99.3% | 83.8% |
| 5007641 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.63 | 55.0 | 4.66e-01 | 94.1% | 98.4% |
| 3965972 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.62 | 56.0 | 4.23e-01 | 99.3% | 87.4% |
| 5045814 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.61 | 54.0 | 4.22e-01 | 97.4% | 64.3% |
| 3289671 | 7529.1.1.0 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like | 0.61 | 54.0 | 4.95e-01 | 96.7% | 95.0% |
| 3879370 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.61 | 54.0 | 4.97e-01 | 96.1% | 99.0% |
| 3229836 | 7529.1.1.19 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › PF29699 | 0.61 | 52.0 | 4.51e-01 | 93.4% | 96.7% |
| 4947078 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.60 | 53.0 | 5.01e-01 | 95.4% | 100.0% |
| 1501440 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.60 | 53.0 | 4.97e-01 | 96.1% | 98.4% |
| 2171605 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.59 | 52.0 | 4.78e-01 | 96.1% | 96.0% |
| 3698641 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.59 | 52.0 | 4.39e-01 | 97.4% | 70.2% |
| 2623804 | 7529.1.1.14 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › PF29356 | 0.57 | 51.0 | 4.20e-01 | 96.7% | 98.9% |
| 3717025 | 7529.1.1.0 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like | 0.57 | 49.0 | 4.41e-01 | 92.1% | 92.7% |
| 3507735 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.57 | 53.0 | 4.93e-01 | 100.0% | 88.3% |
| 3256637 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.57 | 46.0 | 3.87e-01 | 85.5% | 82.8% |
| 3798186 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.56 | 53.0 | 3.85e-01 | 100.0% | 45.6% |
| 5031826 | 2004.1.1.206 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 | 0.56 | 48.0 | 4.61e-01 | 90.8% | 89.4% |
| 3563211 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.56 | 49.0 | 4.58e-01 | 96.7% | 91.6% |
| 5049163 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.56 | 46.0 | 4.56e-01 | 89.5% | 100.0% |
| 5047930 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.56 | 48.0 | 4.06e-01 | 94.7% | 98.8% |
| 5046865 | 2004.1.1.206 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 | 0.56 | 49.0 | 4.04e-01 | 94.1% | 67.5% |
| 3731121 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.55 | 48.0 | 4.46e-01 | 96.7% | 90.0% |
| 3601536 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 46.0 | 4.55e-01 | 90.8% | 97.6% |
| 5081181 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 48.0 | 4.10e-01 | 96.1% | 73.9% |
| 4038767 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.55 | 48.0 | 4.49e-01 | 95.4% | 99.5% |
| 4931786 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.54 | 46.0 | 4.49e-01 | 90.8% | 100.0% |
| 5057145 | 2004.1.1.1200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF835 | 0.54 | 47.0 | 4.53e-01 | 95.4% | 86.8% |
| 4927826 | 2004.1.1.206 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 | 0.54 | 47.0 | 3.78e-01 | 93.4% | 68.3% |
| 3961973 | 2002.1.2.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 | 0.54 | 43.0 | 3.92e-01 | 84.2% | 93.5% |
| 4999541 | 2004.1.1.260 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MEDS | 0.54 | 47.0 | 4.34e-01 | 97.4% | 94.0% |
| 4957361 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.53 | 46.0 | 4.03e-01 | 96.1% | 79.6% |
| 5074076 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.53 | 46.0 | 4.03e-01 | 96.1% | 79.1% |
| 1179897 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.53 | 40.0 | 3.62e-01 | 80.3% | 76.5% |
| 4611993 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.53 | 44.0 | 4.39e-01 | 89.5% | 100.0% |
| 3285922 | 2004.1.1.970 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Barstar | 0.53 | 46.0 | 4.57e-01 | 96.1% | 98.1% |
| 5071391 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.53 | 46.0 | 3.95e-01 | 96.1% | 77.6% |
| 5078089 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.52 | 43.0 | 3.92e-01 | 90.8% | 84.2% |
| 3958641 | 2004.1.1.260 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MEDS | 0.52 | 44.0 | 4.27e-01 | 92.8% | 97.1% |
| 3169441 | 2004.1.1.128 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PAXNEB | 0.52 | 46.0 | 3.72e-01 | 96.1% | 82.9% |
| 5069572 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.52 | 47.0 | 4.14e-01 | 99.3% | 91.5% |
| 5067491 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 45.0 | 4.22e-01 | 95.4% | 92.1% |
| 3954133 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.52 | 30.0 | 3.12e-01 | 82.9% | 59.3% |
| 4944897 | 2002.1.1.79 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 | 0.51 | 44.0 | 3.56e-01 | 92.1% | 92.6% |
| 5035716 | 2004.1.1.141 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CTP_synth_N | 0.51 | 44.0 | 4.11e-01 | 92.8% | 88.6% |
| 3781041 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.51 | 44.0 | 3.73e-01 | 96.1% | 75.8% |
| 4983673 | 2007.22.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Methyl-viologen reducing hydrogenase subunit D › Methyl-viologen reducing hydrogenase subunit D › FlpD | 0.50 | 35.0 | 3.40e-01 | 71.7% | 67.8% |
D2
medium
residues 171-278