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IMGVR_UViG_3300025288_001461-3300025288-Ga0210044_10000075107

Arc-Vir

IMGVR_UViG_3300025288_001461-3300025288-Ga0210044_10000075107

Quality

83.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 71-252
PDB
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF07724.21 best AAA_2 84.1 1.60e-23 76.9% 72.9%
PF00004.36 AAA 65.5 9.50e-18 73.6% 75.6%
PF00493.30 MCM 33.2 4.10e-08 71.4% 52.7%
PF07728.21 AAA_5 26.4 8.40e-06 44.5% 56.8%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g41A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.93 82.0 8.02e-01 100.0% 85.5%
1um8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.88 77.0 6.92e-01 100.0% 70.0%
1in4A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.84 55.0 6.08e-01 96.7% 80.5%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.83 59.0 6.47e-01 100.0% 87.3%
3d8bA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 59.0 5.63e-01 96.7% 66.2%
3u61C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 52.0 5.49e-01 96.7% 74.1%
3pvsB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 51.0 5.57e-01 97.3% 78.8%
1r6bX04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 64.0 6.23e-01 100.0% 79.7%
3t15A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 55.0 5.88e-01 99.5% 86.5%
6az0A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 58.0 6.06e-01 96.7% 85.3%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 49.0 5.40e-01 91.8% 83.2%
2c9oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 57.0 5.55e-01 100.0% 74.5%
1sxjA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 56.0 5.66e-01 96.7% 82.1%
3sylA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 58.0 5.68e-01 100.0% 78.9%
7l9pE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 61.0 5.79e-01 96.7% 78.3%
7jpoE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 51.0 5.43e-01 91.8% 87.6%
3vkhA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 52.0 4.15e-01 96.2% 42.2%
7rzy101 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 53.0 5.29e-01 95.1% 84.5%
7tjhE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 50.0 5.05e-01 91.8% 89.3%
3vkgA10 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 53.0 5.16e-01 100.0% 88.3%
2fnaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 49.0 4.70e-01 96.2% 79.8%
5ahoA02 3.40.50.12650 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 33.0 3.92e-01 92.9% 82.1%
7xpcA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 52.0 4.27e-01 98.4% 89.0%
4ritA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 38.0 3.52e-01 92.3% 54.2%
1fs0G01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.54 29.0 3.37e-01 94.5% 70.8%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 47.0 4.55e-01 95.6% 83.5%
6bogA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 36.0 3.49e-01 90.1% 59.3%
3rc3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 36.0 3.86e-01 77.5% 78.6%
6ajpA00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.53 42.0 4.04e-01 83.5% 92.7%
4kfuA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 36.0 3.47e-01 92.3% 60.5%
4xjxA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 45.0 4.45e-01 94.5% 86.9%
3pp8A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 37.0 3.77e-01 92.3% 72.1%
3c8uA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 36.0 3.47e-01 97.8% 63.6%
2z0mA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 43.0 4.32e-01 98.9% 87.4%
5itwA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 38.0 3.44e-01 79.1% 80.8%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.98 96.0 8.19e-01 100.0% 70.9%
4093256 2004.1.1.545 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2, AAA_5 0.98 96.0 8.17e-01 100.0% 69.4%
4078571 2004.1.1.424 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase, AAA_2, AAA_5 0.96 94.0 8.29e-01 100.0% 74.7%
4490249 2004.1.1.545 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2, AAA_5 0.96 94.0 8.28e-01 100.0% 74.7%
None 0.96 94.0 7.84e-01 100.0% 65.4%
4568966 2004.1.1.456 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N, AAA_2 0.96 94.0 8.20e-01 100.0% 73.2%
None 0.96 94.0 7.63e-01 100.0% 60.7%
None 0.96 94.0 7.58e-01 100.0% 60.0%
None 0.96 94.0 7.58e-01 100.0% 60.0%
None 0.96 94.0 7.77e-01 100.0% 64.2%
None 0.96 94.0 7.58e-01 100.0% 60.0%
None 0.96 94.0 7.21e-01 100.0% 52.3%
4388243 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.96 94.0 7.14e-01 100.0% 51.7%
4090171 2004.1.1.424 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase, AAA_2, AAA_5 0.95 94.0 7.91e-01 100.0% 68.1%
None 0.95 94.0 7.55e-01 100.0% 61.6%
None 0.95 93.0 7.94e-01 100.0% 69.1%
3364572 2004.1.1.154 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.95 93.0 7.44e-01 100.0% 63.2%
4554144 2004.1.1.441 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2 0.95 93.0 7.94e-01 100.0% 69.1%
None 0.95 93.0 7.88e-01 100.0% 71.5%
4172408 2004.1.1.154 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.95 93.0 7.92e-01 100.0% 69.1%
None 0.95 93.0 7.98e-01 100.0% 71.9%
None 0.95 93.0 7.84e-01 100.0% 73.3%
4247371 2004.1.1.669 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase, AAA_2 0.95 93.0 7.85e-01 100.0% 70.7%
4051403 2004.1.1.456 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N, AAA_2 0.95 93.0 7.89e-01 100.0% 69.1%
3344098 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.95 92.0 6.87e-01 100.0% 51.8%
3674894 2004.1.1.441 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2 0.94 92.0 7.58e-01 100.0% 69.3%
None 0.94 90.0 7.29e-01 100.0% 58.4%
None 0.94 92.0 7.35e-01 100.0% 61.3%
3995568 2004.1.1.153 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.93 91.0 7.53e-01 100.0% 70.0%
3665498 2004.1.1.153 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.93 90.0 7.40e-01 100.0% 68.8%
3212870 2004.1.1.154 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.92 90.0 7.20e-01 100.0% 72.7%
3194715 2004.1.1.154 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.90 87.0 7.26e-01 100.0% 75.4%
3623678 2004.1.1.154 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.88 86.0 7.18e-01 100.0% 67.5%
4643309 2004.1.1.702 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, MCM, AAA_2 0.87 84.0 6.61e-01 100.0% 89.3%
4134121 2004.1.1.623 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, MCM, AAA_2, AAA_5 0.86 84.0 6.58e-01 100.0% 89.3%
3595524 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.86 84.0 6.72e-01 100.0% 90.8%
4377664 2004.1.1.545 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, AAA_2, AAA_5 0.86 84.0 6.72e-01 100.0% 88.6%
4275455 2004.1.1.258 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 0.86 84.0 6.57e-01 100.0% 89.0%
4102348 2004.1.1.493 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, AAA_2, AAA_5 0.86 84.0 6.57e-01 100.0% 89.0%
3704999 2004.1.1.154 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.86 84.0 6.43e-01 100.0% 88.2%
3614893 2004.1.1.493 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, AAA_2, AAA_5 0.86 83.0 6.52e-01 100.0% 87.6%
4091103 2004.1.1.258 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 0.86 83.0 6.64e-01 100.0% 92.2%
3248250 2004.1.1.154 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2,AAA_5 0.85 83.0 6.33e-01 100.0% 79.5%
4039355 2004.1.1.258 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA,AAA_2 0.85 83.0 6.40e-01 100.0% 92.3%
5028604 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.83 57.0 6.14e-01 97.3% 80.6%
3663724 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.80 58.0 6.00e-01 95.6% 77.1%
4989618 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.80 60.0 5.72e-01 96.7% 67.3%
3838853 2004.1.1.125 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N 0.80 51.0 5.68e-01 97.3% 80.0%
3740404 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.80 59.0 6.26e-01 96.2% 85.6%
4026360 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.79 58.0 5.75e-01 97.3% 71.6%
3576751 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.79 62.0 5.72e-01 96.7% 65.3%
3514544 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.79 53.0 5.54e-01 96.7% 72.9%
4566229 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.79 67.0 4.73e-01 100.0% 32.3%
5001488 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.78 62.0 4.48e-01 96.7% 31.8%
None 0.77 57.0 6.06e-01 97.3% 85.0%
4968899 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.77 59.0 6.10e-01 96.2% 83.5%
4405880 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.77 63.0 6.26e-01 96.2% 83.2%
3595856 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 55.0 5.64e-01 96.7% 76.0%
3783664 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.76 53.0 5.48e-01 96.7% 74.7%
3450222 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.76 62.0 6.34e-01 97.3% 87.4%
4023471 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 55.0 5.63e-01 97.8% 76.0%
3839304 2004.1.1.153 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.76 63.0 6.00e-01 100.0% 74.8%
4542391 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 53.0 4.70e-01 96.2% 51.6%
3402837 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.75 60.0 5.92e-01 96.2% 78.4%
3803657 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.75 55.0 5.16e-01 96.7% 62.8%
4646556 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.75 61.0 5.98e-01 96.2% 79.0%
3725962 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.74 54.0 5.33e-01 95.6% 70.5%
4022961 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 57.0 5.26e-01 97.3% 62.6%
3263243 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.74 61.0 5.96e-01 100.0% 79.0%
3188500 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.74 55.0 5.24e-01 97.3% 66.5%
None 0.74 61.0 5.82e-01 96.7% 76.1%
3601515 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 53.0 4.73e-01 96.7% 53.6%
3937017 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.73 55.0 4.84e-01 96.7% 54.9%
3275244 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.73 58.0 5.71e-01 96.7% 78.4%
3731180 2004.1.1.420 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 0.72 69.0 5.68e-01 100.0% 70.7%
3629727 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.72 64.0 5.78e-01 96.7% 71.5%
3592252 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 61.0 5.94e-01 97.8% 82.6%
5051791 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.71 55.0 5.49e-01 95.1% 77.8%
3266051 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 57.0 5.68e-01 95.6% 80.0%
4354898 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 60.0 5.92e-01 96.7% 83.1%
3704569 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 61.0 5.97e-01 98.9% 84.6%
4018671 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 57.0 4.98e-01 97.8% 57.4%
3734576 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.70 56.0 5.04e-01 96.7% 61.6%
3673511 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 59.0 5.64e-01 95.6% 78.0%
3071116 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 62.0 6.03e-01 98.9% 86.7%
4510322 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.70 58.0 5.56e-01 96.7% 77.1%
3693651 2004.1.1.190 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16,ORC5_lid 0.69 58.0 4.70e-01 100.0% 49.2%
5036743 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.68 56.0 5.63e-01 96.2% 85.0%
3496490 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 53.0 5.29e-01 97.3% 77.9%
3402694 2004.1.1.98 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad17 0.68 54.0 5.28e-01 97.3% 76.9%
4001466 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.66 61.0 5.43e-01 100.0% 70.2%
5049531 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.66 58.0 5.66e-01 96.7% 86.2%
3716030 138.1.1.13 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › AAA 0.63 56.0 4.30e-01 96.7% 44.5%
3709153 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.63 56.0 5.32e-01 96.7% 80.5%
3593283 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 56.0 4.89e-01 100.0% 77.7%
2172491 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 47.0 4.04e-01 95.6% 73.8%
D2 high residues 324-402
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10431.16 best ClpB_D2-small 36.4 6.00e-09 91.1% 65.4%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1um8A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.98 94.0 8.66e-01 100.0% 81.4%
1e94E03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.97 93.0 8.24e-01 100.0% 79.2%
1r6bX05 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.82 76.0 6.97e-01 100.0% 80.8%
4ciuA04 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.82 75.0 7.11e-01 100.0% 86.0%
2kebA00 1.10.8.530 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain 0.80 54.0 5.53e-01 100.0% 71.8%
2qbyA01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.77 58.0 5.31e-01 100.0% 61.2%
1sxjE02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.76 52.0 5.65e-01 97.5% 87.5%
4p17A02 1.10.8.270 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains 0.65 51.0 4.60e-01 100.0% 60.9%
2x49A03 1.10.8.540 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › FHIPEP family, domain 3 0.64 49.0 4.75e-01 92.4% 73.3%
1jfzA00 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.60 49.0 4.12e-01 94.9% 86.5%
2yogA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 47.0 3.61e-01 97.5% 91.9%
2hxoA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 43.0 3.62e-01 93.7% 78.5%
1u0mA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 37.0 3.16e-01 78.5% 73.3%
7t85A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 3.17e-01 84.8% 90.1%
1sg2A00 3.30.910.20 Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain 0.50 36.0 3.11e-01 78.5% 97.9%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4596842 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.98 95.0 7.99e-01 100.0% 70.0%
1303233 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.97 94.0 7.69e-01 100.0% 61.7%
4558893 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.97 94.0 8.88e-01 100.0% 88.9%
3582881 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.97 93.0 8.63e-01 100.0% 83.2%
4027606 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.97 93.0 7.95e-01 100.0% 73.0%
4579942 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.97 93.0 8.10e-01 100.0% 76.4%
None 0.96 93.0 5.76e-01 100.0% 22.9%
4388243 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.96 93.0 5.73e-01 100.0% 22.5%
4094445 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.96 93.0 8.21e-01 100.0% 76.2%
3487258 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.96 92.0 8.37e-01 100.0% 79.0%
3212882 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.96 92.0 8.53e-01 100.0% 83.2%
3601921 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.96 92.0 8.01e-01 100.0% 76.4%
4566551 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.96 92.0 7.87e-01 100.0% 76.5%
3638255 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.95 91.0 7.58e-01 100.0% 63.2%
3450454 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.95 92.0 7.28e-01 100.0% 60.0%
3344098 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.95 91.0 5.58e-01 100.0% 21.5%
3075092 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.94 90.0 8.24e-01 100.0% 81.6%
4549893 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.94 90.0 7.79e-01 100.0% 74.3%
3839924 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.88 83.0 7.73e-01 100.0% 83.2%
3969278 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.85 80.0 7.49e-01 100.0% 83.2%
3669409 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.85 80.0 7.30e-01 100.0% 79.0%
3387640 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.85 80.0 7.60e-01 100.0% 87.8%
4029162 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.85 80.0 7.42e-01 100.0% 83.2%
3004432 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.84 79.0 7.21e-01 100.0% 79.8%
3974634 148.1.3.261 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small, AAA_lid_9 0.84 78.0 5.06e-01 100.0% 26.1%
4015704 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.84 78.0 7.33e-01 100.0% 84.0%
4571266 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.84 78.0 7.31e-01 100.0% 83.2%
3703884 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.84 78.0 7.28e-01 100.0% 83.2%
3983704 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 77.0 6.97e-01 98.7% 75.7%
3588671 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 78.0 7.27e-01 100.0% 83.2%
4403270 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 78.0 7.31e-01 100.0% 84.0%
4493849 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 78.0 7.45e-01 100.0% 88.8%
3360121 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 77.0 7.07e-01 100.0% 79.0%
3987312 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 75.0 7.19e-01 100.0% 85.6%
4363328 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 77.0 7.20e-01 100.0% 83.2%
3326552 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 78.0 7.09e-01 100.0% 79.0%
4089761 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 77.0 7.37e-01 100.0% 87.8%
3961087 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.83 77.0 6.91e-01 100.0% 75.2%
4154381 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.82 77.0 7.31e-01 100.0% 87.8%
4422723 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.82 77.0 7.15e-01 100.0% 83.2%
2979521 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 76.0 6.99e-01 100.0% 80.0%
1309645 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.82 76.0 6.26e-01 100.0% 60.2%
4621870 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.82 76.0 7.13e-01 100.0% 85.3%
4197048 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.82 76.0 6.96e-01 100.0% 80.0%
3010735 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 76.0 6.89e-01 100.0% 77.5%
4825678 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.82 76.0 5.72e-01 100.0% 45.7%
2754894 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.81 75.0 6.44e-01 100.0% 65.3%
4031233 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.81 75.0 7.13e-01 100.0% 86.7%
4198791 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.81 76.0 7.21e-01 100.0% 87.8%
4320100 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.81 74.0 7.11e-01 98.7% 86.7%
4419950 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.81 75.0 6.64e-01 100.0% 71.8%
3815913 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.81 75.0 7.00e-01 100.0% 83.2%
3594854 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 75.0 6.99e-01 100.0% 84.2%
4023701 148.1.3.261 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small, AAA_lid_9 0.81 75.0 4.91e-01 100.0% 26.3%
4081190 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.81 74.0 6.18e-01 100.0% 61.5%
4960795 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.80 73.0 6.89e-01 100.0% 84.2%
1383593 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.80 74.0 6.76e-01 100.0% 77.5%
3388255 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.80 72.0 6.90e-01 100.0% 86.5%
3270907 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.80 73.0 7.02e-01 100.0% 87.8%
4044739 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.80 73.0 6.56e-01 98.7% 76.2%
4160488 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.80 73.0 6.85e-01 100.0% 85.3%
3967645 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.79 72.0 6.79e-01 100.0% 86.3%
4391280 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.79 72.0 6.78e-01 100.0% 85.3%
5024090 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 65.0 6.47e-01 97.5% 87.5%
4028080 148.1.3.8 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.78 71.0 6.69e-01 100.0% 87.4%
3806710 148.1.3.211 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 0.72 64.0 6.28e-01 100.0% 95.3%
3435276 148.1.3.211 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 0.72 63.0 6.05e-01 98.7% 85.6%
3369792 148.1.3.211 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 0.72 63.0 5.98e-01 100.0% 84.2%
3828121 148.1.3.211 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 0.71 62.0 5.41e-01 100.0% 68.8%
3612861 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.69 60.0 5.51e-01 98.7% 87.6%
3669454 148.1.3.211 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 0.69 60.0 5.52e-01 100.0% 80.0%
3350475 148.1.3.211 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 0.68 60.0 5.82e-01 100.0% 92.2%
3810079 148.1.3.211 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 0.68 59.0 5.86e-01 100.0% 92.9%
3246932 2498.1.1.5 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M13,Peptidase_M13_N 0.60 50.0 3.06e-01 97.5% 27.0%
4503600 2004.1.1.60 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI 0.54 41.0 3.19e-01 84.8% 91.6%
5033116 1134.1.2.0 alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain 0.51 39.0 3.84e-01 100.0% 78.8%
D3 medium residues 1-66
PDB