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IMGVR_UViG_3300025288_001461-3300025288-Ga0210044_10000075150
Arc-VirIMGVR_UViG_3300025288_001461-3300025288-Ga0210044_10000075150
Identity
- Kingdom:
- archaea
Quality
87.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-123_244-280
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04332.22 best | DUF475 | 88.0 | 1.50e-24 | 45.0% | 24.2% |
| PF04332.22 | DUF475 | 50.3 | 4.60e-13 | 26.9% | 13.3% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8ex5A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.73 | 50.0 | 4.70e-01 | 98.1% | 58.1% |
| 4iu9B01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.67 | 47.0 | 4.20e-01 | 98.1% | 50.9% |
| 7dl9A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.66 | 45.0 | 4.28e-01 | 98.1% | 57.7% |
| 3owaB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.65 | 29.0 | 2.93e-01 | 100.0% | 40.8% |
| 8sbeA02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.63 | 46.0 | 4.43e-01 | 98.1% | 64.7% |
| 7cafA01 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.60 | 42.0 | 3.55e-01 | 83.1% | 42.0% |
| 2vixA03 | 1.20.1280.240 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.59 | 34.0 | 3.93e-01 | 96.9% | 77.9% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 29.0 | 3.15e-01 | 100.0% | 56.1% |
| 2zy9A03 | 1.10.357.20 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain | 0.56 | 38.0 | 3.69e-01 | 90.0% | 61.5% |
| 3ljbA00 | 1.20.120.1240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain | 0.56 | 39.0 | 3.56e-01 | 86.3% | 51.6% |
| 3edvB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 29.0 | 3.10e-01 | 81.9% | 55.1% |
| 1eq1A00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.55 | 42.0 | 4.18e-01 | 100.0% | 76.5% |
| 3rlfF04 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.54 | 40.0 | 3.54e-01 | 85.0% | 52.1% |
| 5nl6B01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 33.0 | 3.68e-01 | 71.2% | 79.3% |
| 3b9wA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.53 | 43.0 | 3.30e-01 | 85.0% | 94.5% |
| 3um7A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 31.0 | 3.69e-01 | 99.4% | 88.3% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.51 | 36.0 | 4.08e-01 | 100.0% | 99.1% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953696 | 5051.1.1.14 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › DUF475 | 0.93 | 88.0 | 6.51e-01 | 97.5% | 82.9% |
| 4527446 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.71 | 49.0 | 4.58e-01 | 98.8% | 56.5% |
| 3633559 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.67 | 47.0 | 4.23e-01 | 98.1% | 51.6% |
| 3953897 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.66 | 49.0 | 4.45e-01 | 98.1% | 56.7% |
| 5002671 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.62 | 28.0 | 2.87e-01 | 100.0% | 42.5% |
| 4528918 | 1079.1.1.13 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Mntp | 0.61 | 44.0 | 4.35e-01 | 98.8% | 68.6% |
| 3413601 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.61 | 46.0 | 4.07e-01 | 98.1% | 53.6% |
| 4996626 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 27.0 | 2.31e-01 | 72.5% | 26.3% |
| 4033226 | 1075.3.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold | 0.60 | 39.0 | 3.45e-01 | 83.1% | 44.3% |
| 5057841 | 1079.1.1.1 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD | 0.58 | 46.0 | 4.04e-01 | 100.0% | 54.7% |
| 4932476 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.58 | 47.0 | 4.28e-01 | 100.0% | 65.7% |
| 4401422 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.57 | 43.0 | 3.77e-01 | 95.6% | 50.6% |
| 3979848 | 1075.1.1.22 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › MlaE | 0.56 | 45.0 | 4.00e-01 | 85.0% | 60.9% |
| 4955097 | 1188.1.1.3 ↗ | alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Mntp | 0.56 | 42.0 | 4.03e-01 | 100.0% | 67.6% |
| None | — | 0.56 | 41.0 | 3.57e-01 | 99.4% | 48.8% | |
| 4364069 | 607.1.1.1 ↗ | alpha arrays › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › PEP-utilisers_N | 0.56 | 37.0 | 4.11e-01 | 95.0% | 85.6% |
| 5002997 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.56 | 38.0 | 3.16e-01 | 78.8% | 40.4% |
| 3276109 | 5073.1.1.11 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C | 0.55 | 43.0 | 3.19e-01 | 81.2% | 71.3% |
| 3199349 | 1188.1.1.0 ↗ | alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter | 0.54 | 48.0 | 4.02e-01 | 97.5% | 74.6% |
| 3960017 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.54 | 44.0 | 3.66e-01 | 100.0% | 47.8% |
| 5024408 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.53 | 29.0 | 2.80e-01 | 100.0% | 46.5% |
| 5056276 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.52 | 40.0 | 4.06e-01 | 81.9% | 96.2% |
| 4960584 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.52 | 41.0 | 3.82e-01 | 100.0% | 66.3% |
| 3367916 | 5067.1.1.13 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › ALMT | 0.51 | 42.0 | 4.35e-01 | 100.0% | 90.3% |
| 4407105 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.51 | 38.0 | 3.22e-01 | 81.2% | 46.9% |
| 4034035 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.50 | 45.0 | 4.12e-01 | 98.8% | 91.0% |
| 3946501 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.50 | 40.0 | 3.78e-01 | 99.4% | 69.5% |