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IMGVR_UViG_3300025288_001461-3300025288-Ga0210044_10000075154

Arc-Vir

IMGVR_UViG_3300025288_001461-3300025288-Ga0210044_10000075154

Quality

84.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-46_60-145
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01987.24 best AIM24 102.3 4.20e-29 98.5% 67.8%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yoxA00 3.60.160.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Mitochondrial biogenesis AIM24 0.92 78.0 6.71e-01 100.0% 60.5%
1pg6A00 3.60.160.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Mitochondrial biogenesis AIM24 0.87 84.0 6.88e-01 100.0% 64.4%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 39.0 4.72e-01 98.5% 100.0%
4llfD02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 37.0 3.85e-01 72.7% 73.3%
7jsdA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.56 41.0 3.38e-01 77.3% 88.9%
4binA01 2.60.40.3500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 35.0 3.69e-01 100.0% 74.1%
4cucA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 4.39e-01 100.0% 94.8%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.52 39.0 3.21e-01 77.3% 75.4%
2bv4A00 2.60.120.400 Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin 0.52 36.0 3.82e-01 70.5% 99.1%
4ok4A02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 38.0 2.84e-01 77.3% 61.2%
3gm8A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 4.19e-01 100.0% 96.4%
2waaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 36.0 3.75e-01 72.7% 87.0%
4es8B01 2.60.120.1240 Mainly Beta › Sandwich › Jelly Rolls › 0.51 36.0 3.19e-01 72.7% 95.9%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 33.0 3.87e-01 100.0% 97.8%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3288334 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.89 85.0 6.96e-01 100.0% 65.5%
3684903 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.88 85.0 6.90e-01 100.0% 62.3%
1366 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.87 84.0 6.88e-01 100.0% 64.4%
5031108 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.87 83.0 6.66e-01 100.0% 62.1%
3965981 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.86 82.0 6.57e-01 100.0% 65.5%
5038303 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.86 82.0 6.68e-01 100.0% 67.6%
4947444 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.86 82.0 6.60e-01 100.0% 63.0%
4927461 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.86 82.0 6.72e-01 100.0% 65.3%
4932199 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.85 81.0 6.65e-01 100.0% 65.0%
4999619 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.84 80.0 6.46e-01 100.0% 64.8%
4992289 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.84 80.0 6.49e-01 100.0% 61.8%
5038130 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.84 80.0 6.59e-01 100.0% 65.6%
3803255 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.83 80.0 6.43e-01 100.0% 64.8%
5038168 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.83 80.0 6.56e-01 100.0% 66.0%
4304396 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.83 79.0 6.49e-01 99.2% 68.8%
3288402 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.83 78.0 6.53e-01 99.2% 63.8%
4973502 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.83 79.0 6.52e-01 100.0% 66.0%
4361188 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.82 77.0 6.26e-01 99.2% 69.0%
3280187 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.82 78.0 6.55e-01 100.0% 66.8%
3784703 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.81 77.0 6.07e-01 99.2% 71.0%
4426211 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.81 77.0 6.40e-01 100.0% 68.1%
4553814 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.80 76.0 6.22e-01 99.2% 74.9%
3782559 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.80 76.0 6.42e-01 100.0% 68.8%
4239884 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.80 76.0 6.09e-01 100.0% 67.6%
4566585 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.79 75.0 6.01e-01 99.2% 67.1%
5023204 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.77 73.0 5.99e-01 100.0% 62.6%
3289036 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.77 70.0 6.16e-01 97.0% 68.1%
4960337 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.76 69.0 5.64e-01 96.2% 85.1%
5019767 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.74 67.0 5.51e-01 96.2% 92.0%
5014155 11.1.1.1418 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_14 0.51 35.0 3.87e-01 97.7% 85.2%
D2 medium residues 146-232
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01987.24 best AIM24 60.3 3.20e-16 81.6% 30.7%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yoxA00 3.60.160.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Mitochondrial biogenesis AIM24 0.88 68.0 5.12e-01 100.0% 36.8%
1pg6A00 3.60.160.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Mitochondrial biogenesis AIM24 0.86 72.0 5.17e-01 96.6% 35.2%
6bs6B01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 38.0 3.76e-01 87.4% 63.0%
3dv8A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 46.0 3.99e-01 93.1% 69.8%
3purA02 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.55 45.0 3.18e-01 92.0% 38.8%
1hw5A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 43.0 3.77e-01 85.1% 69.8%
1zx5A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 42.0 4.30e-01 87.4% 86.7%
3fx3B01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 45.0 3.89e-01 92.0% 68.4%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.54 41.0 3.94e-01 83.9% 91.3%
5mmjj00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.54 37.0 3.56e-01 71.3% 93.9%
3dn7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 43.0 3.65e-01 87.4% 62.1%
2jfdA03 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.53 33.0 3.76e-01 72.4% 83.3%
4ev0D01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 43.0 3.74e-01 88.5% 72.3%
3pcoB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.53 37.0 3.64e-01 73.6% 90.4%
4d7sA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 43.0 3.75e-01 88.5% 68.5%
5v00B01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 39.0 4.06e-01 87.4% 85.4%
5e44A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 43.0 3.66e-01 92.0% 63.7%
2h6cA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 42.0 3.70e-01 88.5% 74.4%
1dzlA00 2.60.175.20 Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Major capsid L1 (late) superfamily, Papillomavirus 0.51 42.0 2.81e-01 97.7% 92.5%
2pqqA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 43.0 3.66e-01 93.1% 72.8%
4n2kA01 2.60.40.1860 Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain 0.51 42.0 3.80e-01 89.7% 75.6%
1omiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 41.0 3.91e-01 92.0% 91.4%
2i0kA03 3.40.462.10 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain 0.50 39.0 2.81e-01 85.1% 60.5%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038130 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.87 71.0 5.10e-01 96.6% 34.4%
5038168 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.86 69.0 5.01e-01 94.3% 34.0%
4973502 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.85 69.0 4.95e-01 94.3% 34.0%
5038303 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.85 68.0 4.88e-01 94.3% 32.4%
3684903 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.84 69.0 4.98e-01 95.4% 34.1%
4999619 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.84 71.0 5.03e-01 96.6% 33.5%
5031108 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.83 73.0 5.23e-01 100.0% 34.9%
4927461 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.83 69.0 4.98e-01 97.7% 34.7%
4932199 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.83 70.0 5.02e-01 95.4% 35.0%
4947444 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.82 72.0 5.17e-01 100.0% 35.2%
3965981 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.82 72.0 5.09e-01 100.0% 34.5%
4992289 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.80 73.0 5.19e-01 100.0% 36.9%
3803255 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.79 68.0 4.85e-01 96.6% 34.3%
3280187 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.77 57.0 4.20e-01 81.6% 32.7%
5023204 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.71 61.0 4.44e-01 97.7% 36.0%
4587968 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.69 61.0 4.66e-01 93.1% 70.6%
3288402 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.69 62.0 4.53e-01 95.4% 66.2%
4960337 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.68 61.0 4.31e-01 93.1% 59.2%
3288334 10.12.1.6 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 0.68 61.0 4.46e-01 97.7% 63.2%
3436141 2003.1.5.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 0.59 42.0 3.17e-01 73.6% 68.5%
3941173 864.1.1.0 a+b two layers › DLC › DLC › DLC 0.58 28.0 3.10e-01 79.3% 52.9%
3253961 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 44.0 3.41e-01 82.8% 45.6%
3929878 864.1.1.0 a+b two layers › DLC › DLC › DLC 0.57 28.0 3.12e-01 81.6% 55.7%
3738924 328.1.1.0 a+b two layers › IF3-like › AlbA-like › AlbA-like 0.56 38.0 3.81e-01 71.3% 94.4%
3839279 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.55 38.0 3.57e-01 71.3% 87.6%
3691478 331.3.1.46 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF7053 0.52 41.0 3.12e-01 86.2% 100.0%
3401330 304.44.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.52 38.0 3.46e-01 78.2% 80.0%
3463183 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.52 36.0 3.24e-01 72.4% 85.8%
3790670 304.44.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.51 38.0 3.22e-01 79.3% 65.3%
3511306 304.44.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.51 38.0 3.31e-01 79.3% 71.9%
3189356 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.51 40.0 3.10e-01 88.5% 100.0%
4525304 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.50 35.0 3.19e-01 71.3% 78.3%