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IMGVR_UViG_3300025312_001061-3300025312-Ga0209321_100196964
Arc-VirIMGVR_UViG_3300025312_001061-3300025312-Ga0209321_100196964
Identity
- Kingdom:
- archaea
Quality
94.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-78
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.76 | 70.0 | 6.75e-01 | 100.0% | 90.8% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.74 | 66.0 | 6.26e-01 | 98.7% | 88.0% |
| 2z0qA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 49.0 | 4.17e-01 | 90.9% | 47.7% |
| 7lt2A01 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.62 | 44.0 | 3.14e-01 | 75.3% | 67.8% |
| 3e4vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 49.0 | 3.74e-01 | 84.4% | 81.0% |
| 1o70A01 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.61 | 52.0 | 4.38e-01 | 100.0% | 79.3% |
| 1o70A02 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.60 | 51.0 | 4.18e-01 | 100.0% | 96.2% |
| 1kz7C02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 52.0 | 4.23e-01 | 98.7% | 53.3% |
| 4zn4A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 42.0 | 2.63e-01 | 100.0% | 13.9% |
| 1ntyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 47.0 | 4.03e-01 | 100.0% | 54.8% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.58 | 35.0 | 3.53e-01 | 100.0% | 59.5% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.58 | 40.0 | 3.23e-01 | 71.4% | 81.5% |
| 1g3pA01 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.57 | 41.0 | 3.97e-01 | 77.9% | 67.0% |
| 1tolA01 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.56 | 41.0 | 4.03e-01 | 76.6% | 72.0% |
| 2iecD00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.55 | 38.0 | 3.34e-01 | 72.7% | 94.9% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 49.0 | 4.23e-01 | 100.0% | 75.8% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 42.0 | 2.84e-01 | 100.0% | 20.4% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 36.0 | 3.75e-01 | 89.6% | 73.6% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 36.0 | 2.42e-01 | 100.0% | 16.5% |
| 2r5vB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 43.0 | 3.38e-01 | 98.7% | 95.9% |
| 3hmzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 40.0 | 3.12e-01 | 88.3% | 74.9% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 36.0 | 2.44e-01 | 100.0% | 16.9% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 43.0 | 4.30e-01 | 98.7% | 95.1% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.50 | 41.0 | 3.39e-01 | 89.6% | 84.3% |
| 6j09A04 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 42.0 | 4.28e-01 | 97.4% | 98.7% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4966645 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.96 | 80.0 | 8.46e-01 | 98.7% | 95.7% |
| 5027650 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.93 | 76.0 | 8.24e-01 | 88.3% | 100.0% |
| 4968449 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.90 | 71.0 | 7.74e-01 | 96.1% | 98.5% |
| 4942674 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.85 | 71.0 | 7.52e-01 | 94.8% | 98.5% |
| 4993636 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.83 | 71.0 | 7.39e-01 | 98.7% | 100.0% |
| 5062732 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.77 | 68.0 | 6.58e-01 | 100.0% | 85.9% |
| 4993827 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.77 | 68.0 | 6.78e-01 | 100.0% | 92.5% |
| 4887373 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.76 | 71.0 | 7.04e-01 | 100.0% | 100.0% |
| 3929144 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.74 | 49.0 | 3.11e-01 | 100.0% | 14.1% |
| 5014619 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.73 | 66.0 | 6.58e-01 | 100.0% | 96.2% |
| 4999510 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.72 | 65.0 | 6.34e-01 | 100.0% | 92.9% |
| 4968774 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.72 | 64.0 | 6.47e-01 | 96.1% | 98.7% |
| 5061264 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.72 | 66.0 | 6.51e-01 | 100.0% | 100.0% |
| 3717243 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.71 | 53.0 | 3.35e-01 | 100.0% | 15.8% |
| 4029991 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 47.0 | 2.98e-01 | 100.0% | 14.1% |
| 5021435 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.69 | 62.0 | 5.46e-01 | 100.0% | 88.7% |
| 3249097 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.68 | 41.0 | 2.62e-01 | 100.0% | 12.9% |
| 4026544 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 40.0 | 2.66e-01 | 100.0% | 15.1% |
| 3717828 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.66 | 46.0 | 2.63e-01 | 100.0% | 7.0% |
| 4383382 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.66 | 46.0 | 3.52e-01 | 74.0% | 44.3% |
| None | — | 0.64 | 44.0 | 2.89e-01 | 100.0% | 16.5% | |
| 4966674 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.64 | 55.0 | 5.41e-01 | 100.0% | 91.8% |
| 3434352 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 41.0 | 2.79e-01 | 100.0% | 17.9% |
| 4029821 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.63 | 43.0 | 3.03e-01 | 100.0% | 23.9% |
| 4187609 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.62 | 38.0 | 3.58e-01 | 98.7% | 48.4% |
| 3274206 | 5.1.4.433 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HPS3_N | 0.62 | 41.0 | 2.67e-01 | 100.0% | 15.8% |
| 3996923 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.62 | 43.0 | 3.48e-01 | 72.7% | 99.3% |
| None | — | 0.62 | 46.0 | 3.14e-01 | 100.0% | 21.4% | |
| 3401853 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.61 | 53.0 | 4.34e-01 | 100.0% | 100.0% |
| 4240090 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.61 | 38.0 | 3.56e-01 | 98.7% | 48.0% |
| 3584223 | 5.1.5.64 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DCAF17 | 0.61 | 44.0 | 2.66e-01 | 75.3% | 71.0% |
| 3743896 | 220.1.1.70 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 | 0.60 | 51.0 | 4.18e-01 | 98.7% | 51.0% |
| 4600925 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 38.0 | 3.56e-01 | 100.0% | 51.6% |
| 3460207 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.59 | 41.0 | 2.85e-01 | 100.0% | 20.7% |
| 3937921 | 5.1.3.170 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd | 0.59 | 44.0 | 2.85e-01 | 100.0% | 18.2% |
| 3406401 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.59 | 50.0 | 4.07e-01 | 98.7% | 48.7% |
| 3628965 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.58 | 52.0 | 4.09e-01 | 100.0% | 49.7% |
| 3449977 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.58 | 50.0 | 4.54e-01 | 100.0% | 96.4% |
| 3178444 | 220.1.1.112 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 | 0.58 | 50.0 | 4.08e-01 | 100.0% | 52.1% |
| 3623666 | 827.1.1.1 ↗ | a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain › Integrin_B_tail | 0.57 | 38.0 | 3.82e-01 | 100.0% | 66.3% |
| 4024970 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.57 | 49.0 | 3.04e-01 | 100.0% | 16.7% |
| 3290823 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.57 | 40.0 | 4.06e-01 | 72.7% | 94.7% |
| 5062589 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 35.0 | 2.97e-01 | 100.0% | 35.4% |
| 4101241 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.57 | 36.0 | 3.33e-01 | 100.0% | 48.0% |
| 2576776 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.56 | 41.0 | 2.72e-01 | 100.0% | 19.7% |
| 4633341 | 5.1.4.103 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DCAF17 | 0.56 | 42.0 | 2.54e-01 | 100.0% | 12.2% |
| 2873129 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.55 | 47.0 | 2.90e-01 | 100.0% | 14.2% |
| 3615349 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 45.0 | 2.54e-01 | 89.6% | 34.7% |
| 2665337 | 3264.1.1.0 ↗ | 0.54 | 41.0 | 3.30e-01 | 94.8% | 40.4% | |
| 3220263 | 2496.1.1.12 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › PHA-1 | 0.53 | 37.0 | 2.95e-01 | 100.0% | 37.3% |
| 3987737 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.53 | 34.0 | 2.86e-01 | 97.4% | 35.7% |
| 4628793 | 211.1.1.47 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase, Glyoxalase_5 | 0.52 | 43.0 | 2.95e-01 | 100.0% | 53.0% |
| 5042593 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.51 | 37.0 | 3.03e-01 | 77.9% | 60.6% |
| 5014277 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.51 | 36.0 | 3.50e-01 | 100.0% | 65.9% |
| 4942077 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.51 | 39.0 | 3.12e-01 | 100.0% | 41.3% |
| 4370053 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.51 | 41.0 | 3.26e-01 | 98.7% | 96.4% |
| 3740272 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.51 | 42.0 | 2.68e-01 | 100.0% | 17.1% |
| 3397097 | 5.1.5.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RAB3GAP2_N | 0.50 | 40.0 | 2.54e-01 | 100.0% | 16.3% |
| 4031368 | 3264.1.1.0 ↗ | 0.50 | 38.0 | 3.15e-01 | 94.8% | 43.4% | |
| 3423257 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.50 | 42.0 | 2.81e-01 | 100.0% | 20.8% |
| 3575893 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.50 | 43.0 | 4.02e-01 | 94.8% | 81.1% |
| 3310438 | 5.1.4.145 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TAF1C_beta-prop | 0.50 | 40.0 | 2.49e-01 | 88.3% | 93.8% |
| 3954970 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.50 | 34.0 | 3.06e-01 | 72.7% | 80.8% |