Back to structures

IMGVR_UViG_3300025312_001081-3300025312-Ga0209321_100009879

Arc-Vir

IMGVR_UViG_3300025312_001081-3300025312-Ga0209321_100009879

Quality

70.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-59
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jqqA00 1.20.58.1240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 43.0 3.14e-01 91.1% 24.7%
1aabA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.59 49.0 4.44e-01 98.2% 72.3%
3ckdA01 1.20.1270.130 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Shigella T3SS effector IpaH domain 0.54 39.0 3.64e-01 92.9% 60.6%
3dkxA02 1.10.10.1480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Plasmid replication protein 0.51 43.0 4.01e-01 91.1% 82.4%
1vfiA00 1.10.246.100 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 0.51 40.0 3.46e-01 91.1% 57.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3682134 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 51.0 5.01e-01 80.4% 90.0%
3788981 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 43.0 4.07e-01 75.0% 96.9%
3707287 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.54 43.0 4.25e-01 96.4% 81.7%