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IMGVR_UViG_3300025313_000071-3300025313-Ga0209431_1000037651
Arc-VirIMGVR_UViG_3300025313_000071-3300025313-Ga0209431_1000037651
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60
Domain cluster:
rep: MK504445.1__QBJ03767.1__ATCCB_0074__00074__D1-84
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00805.29 best | Pentapeptide | 47.8 | 1.20e-12 | 58.3% | 87.5% |
| PF00805.29 | Pentapeptide | 46.0 | 4.10e-12 | 58.3% | 82.5% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2j8kA01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 1.00 | 97.0 | 6.57e-01 | 100.0% | 34.7% |
| 2j8iA01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.99 | 96.0 | 7.71e-01 | 100.0% | 58.8% |
| 3nb2A01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.98 | 95.0 | 6.42e-01 | 100.0% | 44.6% |
| 2xt2B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.96 | 91.0 | 6.10e-01 | 100.0% | 30.9% |
| 2f3lA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.96 | 91.0 | 6.78e-01 | 100.0% | 45.5% |
| 2w7zA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.92 | 85.0 | 5.65e-01 | 100.0% | 29.0% |
| 2xtwD00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.92 | 85.0 | 5.66e-01 | 100.0% | 38.0% |
| 2qyuA01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.87 | 80.0 | 5.76e-01 | 100.0% | 43.3% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.86 | 76.0 | 6.50e-01 | 100.0% | 82.5% |
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 64.0 | 4.12e-01 | 100.0% | 39.3% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 58.0 | 3.39e-01 | 100.0% | 23.1% |
| 2pygA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 56.0 | 3.51e-01 | 100.0% | 28.1% |
| 6kqsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 57.0 | 3.47e-01 | 100.0% | 18.2% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 56.0 | 3.87e-01 | 100.0% | 31.0% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 51.0 | 3.94e-01 | 100.0% | 51.9% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.61 | 51.0 | 3.89e-01 | 100.0% | 50.3% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.60 | 48.0 | 3.78e-01 | 100.0% | 49.7% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4978733 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 97.0 | 6.20e-01 | 100.0% | 26.7% |
| 3414943 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 97.0 | 6.40e-01 | 100.0% | 30.8% |
| 4097358 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 97.0 | 6.72e-01 | 100.0% | 37.5% |
| 4973402 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 1.00 | 97.0 | 6.31e-01 | 100.0% | 29.3% |
| 1176421 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 97.0 | 7.41e-01 | 100.0% | 51.7% |
| 4683546 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 97.0 | 6.21e-01 | 100.0% | 27.3% |
| 3259179 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 1.00 | 97.0 | 6.71e-01 | 100.0% | 37.5% |
| 3449922 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 1.00 | 97.0 | 6.51e-01 | 100.0% | 33.3% |
| 3327690 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 96.0 | 6.70e-01 | 100.0% | 51.2% |
| 3539224 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 1.00 | 97.0 | 6.42e-01 | 100.0% | 31.6% |
| 3974579 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 96.0 | 6.45e-01 | 100.0% | 32.4% |
| 1788824 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 96.0 | 6.12e-01 | 100.0% | 25.8% |
| 1268669 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 96.0 | 6.10e-01 | 100.0% | 25.4% |
| 5017863 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 96.0 | 5.87e-01 | 100.0% | 20.7% |
| 143698 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 1.00 | 96.0 | 6.89e-01 | 100.0% | 41.7% |
| 4542541 | 207.9.1.8 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_3, Pentapeptide_4 | 0.99 | 96.0 | 6.39e-01 | 100.0% | 31.6% |
| 3307274 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 0.99 | 96.0 | 6.79e-01 | 100.0% | 40.0% |
| 4926840 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.99 | 96.0 | 6.67e-01 | 100.0% | 37.5% |
| 1905833 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 0.99 | 96.0 | 6.33e-01 | 100.0% | 40.8% |
| 4996490 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.99 | 95.0 | 6.53e-01 | 100.0% | 35.3% |
| 7227 | 207.9.1.7 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_3 | 0.99 | 95.0 | 6.40e-01 | 100.0% | 33.1% |
| 5057836 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.98 | 95.0 | 6.40e-01 | 100.0% | 33.3% |
| 4654697 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.98 | 94.0 | 6.78e-01 | 100.0% | 41.7% |
| 4804849 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.98 | 94.0 | 9.02e-01 | 100.0% | 89.6% |
| 3967223 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.98 | 94.0 | 6.56e-01 | 100.0% | 37.7% |
| 1630684 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.98 | 94.0 | 6.31e-01 | 100.0% | 42.9% |
| 4308690 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.98 | 93.0 | 6.78e-01 | 100.0% | 42.9% |
| 1176420 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.97 | 75.0 | 8.33e-01 | 80.0% | 100.0% |
| 3427990 | 207.9.1.7 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_3 | 0.97 | 93.0 | 6.62e-01 | 100.0% | 40.0% |
| 3249938 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 0.97 | 93.0 | 6.07e-01 | 100.0% | 28.6% |
| 3337588 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.97 | 93.0 | 6.61e-01 | 100.0% | 40.0% |
| 1176419 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.97 | 92.0 | 7.57e-01 | 100.0% | 81.6% |
| 4959183 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.96 | 91.0 | 5.93e-01 | 100.0% | 27.3% |
| 3598843 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.96 | 91.0 | 6.14e-01 | 100.0% | 43.2% |
| 4008184 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.96 | 90.0 | 5.81e-01 | 100.0% | 26.1% |
| 5018780 | 207.9.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide_3 | 0.94 | 88.0 | 5.86e-01 | 100.0% | 30.0% |
| 3972107 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.94 | 88.0 | 7.36e-01 | 100.0% | 63.2% |
| 3704197 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.92 | 85.0 | 5.61e-01 | 100.0% | 39.5% |
| 3613797 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.92 | 85.0 | 5.62e-01 | 100.0% | 27.5% |
| 3278252 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 0.92 | 85.0 | 5.67e-01 | 100.0% | 39.0% |
| 134728 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 0.92 | 85.0 | 5.65e-01 | 100.0% | 29.0% |
| 4294497 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 0.92 | 85.0 | 5.59e-01 | 100.0% | 30.7% |
| 2434107 | 207.9.1.8 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_3, Pentapeptide_4 | 0.92 | 85.0 | 5.75e-01 | 100.0% | 31.2% |
| 3600332 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.92 | 85.0 | 5.71e-01 | 100.0% | 30.0% |
| 4308074 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 0.92 | 85.0 | 5.65e-01 | 100.0% | 29.3% |
| 4527010 | 207.9.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 | 0.92 | 85.0 | 5.84e-01 | 100.0% | 33.3% |
| 4506663 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.90 | 84.0 | 5.82e-01 | 100.0% | 53.1% |
| 3284600 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.90 | 82.0 | 7.05e-01 | 100.0% | 66.7% |
| 3983450 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.88 | 80.0 | 6.38e-01 | 100.0% | 52.2% |
| 4969960 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.88 | 79.0 | 6.72e-01 | 100.0% | 63.2% |
| 4968345 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.87 | 78.0 | 5.36e-01 | 100.0% | 30.8% |
| 3584966 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.87 | 78.0 | 6.14e-01 | 100.0% | 65.8% |
| 3937180 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.87 | 78.0 | 5.51e-01 | 100.0% | 34.7% |
| 4968415 | 207.9.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide_3 | 0.87 | 78.0 | 5.36e-01 | 100.0% | 31.3% |
| 4982320 | 207.9.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide_3 | 0.86 | 78.0 | 5.43e-01 | 100.0% | 37.3% |
| None | — | 0.86 | 77.0 | 6.48e-01 | 100.0% | 60.0% | |
| 4856486 | 207.9.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › LD_SV2 | 0.85 | 75.0 | 6.14e-01 | 100.0% | 72.1% |
| 4961738 | 207.9.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide_3 | 0.83 | 75.0 | 4.28e-01 | 100.0% | 12.0% |
| 4027041 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.82 | 71.0 | 5.12e-01 | 100.0% | 34.3% |
| 4982115 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.70 | 60.0 | 4.24e-01 | 100.0% | 45.0% |
| 4981810 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.70 | 60.0 | 4.15e-01 | 100.0% | 30.7% |
| 4969230 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 60.0 | 3.76e-01 | 100.0% | 30.7% |
| 4981294 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 59.0 | 4.34e-01 | 100.0% | 42.3% |
| 4940203 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.69 | 59.0 | 4.14e-01 | 100.0% | 31.9% |
| 5075881 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.69 | 59.0 | 3.38e-01 | 100.0% | 10.6% |
| 4940415 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.68 | 59.0 | 3.80e-01 | 100.0% | 31.5% |
| 5040689 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.68 | 58.0 | 3.54e-01 | 100.0% | 21.7% |
| 5043031 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.64 | 53.0 | 3.53e-01 | 100.0% | 55.5% |
| 4012012 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.57 | 50.0 | 4.23e-01 | 100.0% | 62.0% |