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IMGVR_UViG_3300025313_001585-3300025313-Ga0209431_100107027
Arc-VirIMGVR_UViG_3300025313_001585-3300025313-Ga0209431_100107027
Identity
- Kingdom:
- archaea
Quality
75.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 27-53_124-205
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ywwA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 59.0 | 4.90e-01 | 89.0% | 82.9% |
| 4dzzA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 50.0 | 4.06e-01 | 89.0% | 90.8% |
| 1wqaA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.57 | 42.0 | 4.43e-01 | 95.4% | 86.5% |
| 2f7lA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.55 | 41.0 | 4.29e-01 | 97.2% | 86.7% |
| 6njeA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.55 | 45.0 | 3.23e-01 | 86.2% | 79.8% |
| 7wrgB01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.55 | 44.0 | 3.11e-01 | 85.3% | 75.9% |
| 5di3B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.71e-01 | 89.9% | 75.0% |
| 4xc6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 3.29e-01 | 87.2% | 75.4% |
| 2q5cA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 38.0 | 4.06e-01 | 86.2% | 84.5% |
| 1amuA01 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 42.0 | 3.63e-01 | 96.3% | 55.8% |
| 5bmnA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.52 | 45.0 | 4.39e-01 | 100.0% | 85.7% |
| 3wlvA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.52 | 41.0 | 3.07e-01 | 87.2% | 54.8% |
| 3lteD00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 42.0 | 4.06e-01 | 87.2% | 89.4% |
| 2wb4B01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 41.0 | 3.05e-01 | 85.3% | 39.3% |
| 1p5dX03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.51 | 44.0 | 4.27e-01 | 94.5% | 85.7% |
| 3dzzA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 44.0 | 3.35e-01 | 93.6% | 55.7% |
| 1qgnG01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 43.0 | 3.27e-01 | 93.6% | 44.8% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4930767 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 60.0 | 4.45e-01 | 100.0% | 65.7% |
| 4930324 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.65 | 60.0 | 4.93e-01 | 100.0% | 91.6% |
| 3931058 | 7502.1.1.7 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 | 0.60 | 47.0 | 4.83e-01 | 82.6% | 90.5% |
| 3591252 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 43.0 | 3.02e-01 | 75.2% | 59.2% |
| 4292750 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 42.0 | 3.82e-01 | 94.5% | 57.9% |
| 3287337 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 42.0 | 3.75e-01 | 94.5% | 54.8% |
| 4014026 | 5.1.5.71 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF2415 | 0.56 | 43.0 | 2.87e-01 | 81.7% | 44.1% |
| 4683025 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 41.0 | 3.81e-01 | 93.6% | 60.0% |
| 3284480 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.56 | 43.0 | 3.64e-01 | 94.5% | 51.2% |
| 4292751 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 41.0 | 3.76e-01 | 93.6% | 57.9% |
| 4033946 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 40.0 | 3.59e-01 | 94.5% | 52.9% |
| 3962432 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.55 | 40.0 | 3.63e-01 | 93.6% | 56.0% |
| 4320958 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 41.0 | 3.61e-01 | 93.6% | 54.8% |
| 4023152 | 5.1.5.115 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_WDR3_2nd | 0.55 | 42.0 | 2.99e-01 | 82.6% | 44.6% |
| 3264025 | 207.1.1.142 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8 | 0.54 | 45.0 | 2.84e-01 | 89.0% | 34.1% |
| 3193892 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 42.0 | 2.47e-01 | 82.6% | 16.3% |
| 4527283 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 41.0 | 3.68e-01 | 96.3% | 56.8% |
| 5024383 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 41.0 | 3.66e-01 | 93.6% | 57.3% |
| 5039805 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.54 | 44.0 | 3.62e-01 | 87.2% | 65.3% |
| 4423899 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 40.0 | 3.57e-01 | 93.6% | 55.5% |
| 3291388 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 35.0 | 3.39e-01 | 96.3% | 58.4% |
| 5009714 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.53 | 40.0 | 3.48e-01 | 94.5% | 51.2% |
| 3611566 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 40.0 | 2.74e-01 | 80.7% | 47.0% |
| 3242737 | 5.1.5.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › BCAS3_WD40 | 0.53 | 40.0 | 2.57e-01 | 79.8% | 93.7% |
| 3226662 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.53 | 47.0 | 3.73e-01 | 100.0% | 80.4% |
| 4022336 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 41.0 | 2.78e-01 | 81.7% | 49.8% |
| 4203412 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 39.0 | 3.51e-01 | 93.6% | 56.0% |
| 3503098 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.52 | 33.0 | 3.45e-01 | 76.1% | 70.5% |
| 3577252 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 3.71e-01 | 74.3% | 81.8% |
| 3736890 | 5.1.5.236 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR3_1st | 0.52 | 43.0 | 2.57e-01 | 89.0% | 24.3% |
| 3734022 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.51 | 46.0 | 3.53e-01 | 100.0% | 82.6% |
| 3200942 | 5.1.4.263 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_2nd | 0.51 | 42.0 | 2.95e-01 | 89.0% | 53.0% |
| 4464763 | 5.1.4.17 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N | 0.50 | 39.0 | 2.32e-01 | 82.6% | 20.0% |
| 4012216 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.50 | 43.0 | 3.93e-01 | 95.4% | 92.0% |
| 4078162 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 27.0 | 3.21e-01 | 89.9% | 77.0% |
D2
medium
residues 54-123_206-231
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yx1A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.55 | 40.0 | 3.06e-01 | 79.2% | 52.4% |
| 2gerA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 43.0 | 3.60e-01 | 88.5% | 91.9% |
| 6xigA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 39.0 | 2.84e-01 | 79.2% | 66.7% |
| 1exbA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.52 | 45.0 | 3.18e-01 | 96.9% | 90.5% |
| 1vbkA03 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 40.0 | 3.71e-01 | 90.6% | 88.7% |