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IMGVR_UViG_3300025314_000160-3300025314-Ga0209323_1000167317
Arc-VirIMGVR_UViG_3300025314_000160-3300025314-Ga0209323_1000167317
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-52
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.77 | 65.0 | 6.14e-01 | 100.0% | 78.2% |
| 1qlmA02 | 3.30.1030.10 | Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 | 0.70 | 55.0 | 3.63e-01 | 88.9% | 34.8% |
| 3g7kA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.67 | 55.0 | 3.71e-01 | 97.8% | 49.2% |
| 1aj6A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.65 | 54.0 | 3.63e-01 | 100.0% | 38.7% |
| 1bwzA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.63 | 52.0 | 3.92e-01 | 100.0% | 69.3% |
| 5z1gB01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.63 | 53.0 | 3.53e-01 | 100.0% | 36.8% |
| 7mi4A01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.62 | 48.0 | 3.27e-01 | 91.1% | 29.7% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 50.0 | 4.15e-01 | 100.0% | 90.3% |
| 1h9oA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.61 | 49.0 | 3.92e-01 | 100.0% | 45.4% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.61 | 50.0 | 3.17e-01 | 100.0% | 22.9% |
| 3umoA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 50.0 | 3.10e-01 | 100.0% | 18.8% |
| 2cxhA01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.60 | 51.0 | 3.47e-01 | 100.0% | 46.6% |
| 7vtgA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 49.0 | 3.06e-01 | 100.0% | 19.7% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.60 | 44.0 | 3.04e-01 | 91.1% | 24.8% |
| 1iktA00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.59 | 45.0 | 3.49e-01 | 88.9% | 47.8% |
| 3tw8A02 | 3.40.50.11500 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › DENN domain, C-terminal lobe | 0.58 | 45.0 | 3.13e-01 | 86.7% | 51.2% |
| 2bghA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.57 | 46.0 | 3.09e-01 | 97.8% | 33.0% |
| 5bukB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 51.0 | 2.93e-01 | 100.0% | 39.0% |
| 1lp8A01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.57 | 43.0 | 3.06e-01 | 93.3% | 97.8% |
| 1i2dA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.56 | 45.0 | 3.12e-01 | 100.0% | 70.7% |
| 1aalB00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.54 | 36.0 | 3.44e-01 | 80.0% | 54.4% |
| 2g5xA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.54 | 46.0 | 3.17e-01 | 100.0% | 43.6% |
| 2b78A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.54 | 43.0 | 3.99e-01 | 100.0% | 97.0% |
| 3lasA00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.54 | 43.0 | 3.11e-01 | 100.0% | 80.7% |
| 1sgvA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.54 | 44.0 | 4.05e-01 | 100.0% | 87.3% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 38.0 | 3.74e-01 | 75.6% | 83.3% |
| 3ewmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 46.0 | 2.82e-01 | 100.0% | 24.3% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 41.0 | 3.10e-01 | 100.0% | 53.6% |
| 4c1bB01 | 3.40.50.12690 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 36.0 | 3.38e-01 | 75.6% | 53.8% |
| 3hrpA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 44.0 | 2.69e-01 | 97.8% | 41.4% |
| 1a10I00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.52 | 37.0 | 3.46e-01 | 91.1% | 57.1% |
| 3h09A04 | 4.10.1240.40 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.52 | 41.0 | 3.57e-01 | 88.9% | 83.3% |
| 3vseA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.51 | 41.0 | 3.70e-01 | 100.0% | 95.7% |
| 2dirA01 | 3.30.2300.10 | Alpha Beta › 2-Layer Sandwich › THUMP fold › THUMP superfamily | 0.51 | 35.0 | 3.03e-01 | 80.0% | 60.9% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.78 | 67.0 | 3.99e-01 | 100.0% | 17.4% | |
| 4522026 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.73 | 59.0 | 5.25e-01 | 91.1% | 66.2% |
| 3989407 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.72 | 59.0 | 5.29e-01 | 93.3% | 67.7% |
| 3737649 | 3873.1.1.1 ↗ | a+b two layers › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › HGTP_anticodon2 | 0.71 | 57.0 | 4.28e-01 | 91.1% | 65.2% |
| 3590787 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.70 | 58.0 | 4.95e-01 | 93.3% | 66.2% |
| 4177319 | 3585.1.1.1 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C | 0.69 | 57.0 | 4.63e-01 | 93.3% | 58.8% |
| 3608537 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.67 | 57.0 | 4.39e-01 | 100.0% | 94.5% |
| 5045797 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.66 | 54.0 | 3.60e-01 | 91.1% | 29.5% |
| 3420356 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.66 | 56.0 | 4.08e-01 | 100.0% | 37.7% |
| 3890372 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.66 | 56.0 | 4.29e-01 | 100.0% | 46.4% |
| 3960342 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.65 | 57.0 | 3.82e-01 | 100.0% | 38.9% |
| 4346910 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.65 | 49.0 | 3.09e-01 | 91.1% | 15.0% |
| 3613177 | 2004.5.1.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN | 0.64 | 55.0 | 3.43e-01 | 100.0% | 38.3% |
| 3696553 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.62 | 54.0 | 3.67e-01 | 100.0% | 47.9% |
| 5054554 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.61 | 51.0 | 4.06e-01 | 100.0% | 76.0% |
| 3935342 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 50.0 | 3.86e-01 | 100.0% | 41.7% |
| 4457853 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.60 | 47.0 | 4.06e-01 | 91.1% | 58.7% |
| 3671668 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 49.0 | 3.30e-01 | 100.0% | 43.2% |
| 3493378 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.58 | 45.0 | 2.78e-01 | 93.3% | 90.0% |
| 3619626 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 46.0 | 3.78e-01 | 100.0% | 51.6% |
| 3875076 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 45.0 | 3.32e-01 | 100.0% | 37.9% |
| 3217307 | 1.1.9.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF26292 | 0.56 | 45.0 | 3.77e-01 | 97.8% | 94.4% |
| 3278644 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.56 | 42.0 | 2.99e-01 | 91.1% | 22.8% |
| 1714465 | 10.26.1.1 ↗ | beta sandwiches › jelly-roll › Histone H3 binding protein ORF158L › Histone H3 binding protein ORF158L › Pox_C7_F8A | 0.55 | 45.0 | 3.12e-01 | 91.1% | 67.1% |
| 4032339 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.55 | 42.0 | 3.79e-01 | 91.1% | 62.9% |
| 3220873 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.55 | 43.0 | 3.51e-01 | 95.6% | 49.0% |
| 4291634 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.55 | 45.0 | 2.98e-01 | 91.1% | 40.6% |
| 5033143 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.54 | 45.0 | 3.06e-01 | 91.1% | 47.1% |
| 4059404 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.54 | 45.0 | 3.01e-01 | 91.1% | 45.5% |
| 4958105 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.54 | 45.0 | 2.93e-01 | 91.1% | 39.5% |
| 4476167 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.54 | 44.0 | 3.03e-01 | 88.9% | 48.0% |
| 5076764 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.54 | 38.0 | 3.25e-01 | 82.2% | 57.8% |
| None | — | 0.54 | 44.0 | 2.95e-01 | 91.1% | 42.9% | |
| 4991718 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.54 | 44.0 | 2.90e-01 | 91.1% | 38.4% |
| 5037796 | 4143.1.1.0 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like | 0.53 | 44.0 | 3.54e-01 | 91.1% | 64.7% |
| 5036424 | 4143.1.1.0 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like | 0.53 | 38.0 | 3.32e-01 | 82.2% | 56.2% |
| 4203510 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.53 | 42.0 | 2.77e-01 | 88.9% | 37.9% |
| 3617415 | 2004.5.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › PF27109 | 0.52 | 40.0 | 2.86e-01 | 95.6% | 36.8% |
| 1290734 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.52 | 36.0 | 3.03e-01 | 80.0% | 55.2% |
| 3602662 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.51 | 41.0 | 3.14e-01 | 91.1% | 62.7% |
| 4109393 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.51 | 35.0 | 2.56e-01 | 80.0% | 51.8% |
| 4433498 | 4143.1.1.6 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_THUMP_arc | 0.51 | 35.0 | 2.69e-01 | 80.0% | 46.4% |
| 3579037 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.51 | 38.0 | 3.20e-01 | 100.0% | 46.7% |
| 5033559 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.50 | 42.0 | 3.46e-01 | 93.3% | 66.3% |
D2
high
residues 85-122
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.82 | 70.0 | 6.31e-01 | 100.0% | 76.4% |
| 3n3fA01 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.78 | 64.0 | 6.26e-01 | 97.4% | 95.3% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.77 | 62.0 | 5.85e-01 | 100.0% | 80.4% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 53.0 | 3.97e-01 | 100.0% | 40.4% |
| 1h9oA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 50.0 | 3.87e-01 | 100.0% | 44.4% |
| 3mqgA02 | 2.20.70.110 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 48.0 | 4.81e-01 | 89.5% | 94.9% |
| 3bijB00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 43.0 | 2.64e-01 | 73.7% | 35.9% |
| 1tpmA00 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.63 | 46.0 | 4.36e-01 | 86.8% | 72.0% |
| 6p8uA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.61 | 47.0 | 3.39e-01 | 100.0% | 61.1% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.61 | 42.0 | 4.07e-01 | 76.3% | 78.3% |
| 1bwzA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 48.0 | 3.54e-01 | 100.0% | 66.9% |
| 1uoyA01 | 2.30.130.50 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.60 | 48.0 | 4.34e-01 | 97.4% | 68.4% |
| 1yueA02 | 2.10.10.40 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.60 | 49.0 | 4.36e-01 | 100.0% | 93.4% |
| 1e88A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.59 | 44.0 | 4.36e-01 | 89.5% | 81.0% |
| 4iumA00 | 3.90.70.160 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 42.0 | 3.05e-01 | 84.2% | 25.2% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.57 | 46.0 | 3.99e-01 | 100.0% | 97.0% |
| 2nn6G01 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 41.0 | 3.63e-01 | 92.1% | 90.1% |
| 3hi0A02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.55 | 40.0 | 2.72e-01 | 86.8% | 20.8% |
| 4okcA01 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.52 | 41.0 | 3.55e-01 | 97.4% | 53.6% |
| 1zbtA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 2.93e-01 | 100.0% | 35.0% |
| 4wcwA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 36.0 | 2.67e-01 | 71.1% | 51.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3921177 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.85 | 73.0 | 6.46e-01 | 100.0% | 67.3% |
| 3405960 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.81 | 69.0 | 6.68e-01 | 100.0% | 97.7% |
| 3917719 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.81 | 67.0 | 6.44e-01 | 97.4% | 91.1% |
| 3989853 | 77.1.1.13 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › CFSR | 0.80 | 68.0 | 3.97e-01 | 100.0% | 11.7% |
| 3900165 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.79 | 65.0 | 6.37e-01 | 97.4% | 95.3% |
| 3623217 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.79 | 66.0 | 6.13e-01 | 100.0% | 84.0% |
| 5002640 | 3761.1.1.1 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N | 0.79 | 66.0 | 6.18e-01 | 100.0% | 90.0% |
| 1107990 | 3761.1.1.1 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N | 0.77 | 62.0 | 5.88e-01 | 100.0% | 82.0% |
| 3528795 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.73 | 60.0 | 5.83e-01 | 100.0% | 86.7% |
| 4419934 | 4126.1.1.6 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA | 0.72 | 59.0 | 3.69e-01 | 100.0% | 22.4% |
| 2495545 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.72 | 58.0 | 3.30e-01 | 100.0% | 8.8% |
| 3575826 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.66 | 48.0 | 4.53e-01 | 86.8% | 64.0% |
| 3233229 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.65 | 47.0 | 4.71e-01 | 84.2% | 77.5% |
| 4004053 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.64 | 52.0 | 4.06e-01 | 100.0% | 65.3% |
| 3893497 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 48.0 | 4.77e-01 | 86.8% | 85.0% |
| 3931293 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.63 | 47.0 | 3.95e-01 | 86.8% | 44.0% |
| 3847296 | 391.1.2.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › fn1 | 0.62 | 47.0 | 4.66e-01 | 86.8% | 85.0% |
| 4555099 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.62 | 48.0 | 4.44e-01 | 97.4% | 94.5% |
| 3915471 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.61 | 45.0 | 4.54e-01 | 86.8% | 85.0% |
| 4088743 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 48.0 | 4.37e-01 | 100.0% | 86.7% |
| 5079980 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.61 | 49.0 | 3.22e-01 | 100.0% | 24.2% |
| 1245465 | 391.1.1.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 | 0.60 | 44.0 | 4.18e-01 | 86.8% | 68.0% |
| 4492624 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.60 | 46.0 | 4.27e-01 | 97.4% | 92.7% |
| 2494154 | 2003.1.5.88 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Reov_VP3_MTase2 | 0.58 | 42.0 | 2.58e-01 | 100.0% | 12.6% |
| 4167784 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.58 | 41.0 | 3.44e-01 | 71.1% | 52.9% |
| 5015266 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.58 | 44.0 | 3.93e-01 | 97.4% | 93.8% |
| 5035962 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.57 | 42.0 | 3.39e-01 | 84.2% | 48.2% |
| 4971206 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.52 | 41.0 | 2.47e-01 | 100.0% | 45.8% |
| 4065090 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.52 | 37.0 | 3.10e-01 | 97.4% | 96.8% |
| 3593777 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 41.0 | 2.34e-01 | 100.0% | 12.9% |
D3
high
residues 133-314
Domain cluster:
rep: MN136198.2__QEM43051.1__AC4HA13_0076__00076__D266-456