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IMGVR_UViG_3300025319_000019-3300025319-Ga0209520_1000003311
Arc-VirIMGVR_UViG_3300025319_000019-3300025319-Ga0209520_1000003311
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-49
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a4yA01 | 2.60.200.50 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.67 | 45.0 | 3.58e-01 | 71.7% | 40.8% |
| 3gvpA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 41.0 | 2.85e-01 | 71.7% | 18.2% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 40.0 | 3.95e-01 | 100.0% | 62.0% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 41.0 | 4.38e-01 | 89.1% | 87.2% |
| 4hb9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 46.0 | 2.77e-01 | 93.5% | 62.4% |
| 1ye8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 46.0 | 3.13e-01 | 91.3% | 63.2% |
| 2j8gA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.56 | 47.0 | 3.99e-01 | 100.0% | 96.3% |
| 3klkA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.56 | 47.0 | 3.32e-01 | 100.0% | 53.4% |
| 4ifdK02 | 6.10.250.2660 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 37.0 | 4.02e-01 | 73.9% | 94.1% |
| 3jyyA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 35.0 | 2.58e-01 | 71.7% | 20.9% |
| 2a5hA03 | 6.20.120.40 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 37.0 | 3.46e-01 | 95.7% | 54.8% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.54 | 45.0 | 3.05e-01 | 100.0% | 25.0% |
| 2fclA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.53 | 42.0 | 3.07e-01 | 97.8% | 37.2% |
| 2qj6A01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.52 | 42.0 | 3.18e-01 | 97.8% | 52.3% |
| 3udfA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 41.0 | 3.41e-01 | 100.0% | 74.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 147657 | 73.1.1.5 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › PrgH | 0.67 | 45.0 | 3.35e-01 | 71.7% | 32.8% |
| 3990001 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.60 | 41.0 | 4.03e-01 | 89.1% | 64.2% |
| 3698027 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.57 | 46.0 | 2.90e-01 | 95.7% | 60.7% |
| 3723053 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.57 | 45.0 | 2.84e-01 | 93.5% | 40.4% |
| 4345467 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.56 | 47.0 | 2.76e-01 | 100.0% | 14.3% |
| 5019252 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.56 | 47.0 | 2.72e-01 | 100.0% | 12.8% |
| 3732420 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.56 | 45.0 | 2.65e-01 | 95.7% | 64.2% |
| 4591362 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.56 | 45.0 | 3.12e-01 | 100.0% | 44.2% |
| 5055783 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.54 | 45.0 | 3.71e-01 | 100.0% | 71.1% |
| 4596105 | 702.1.1.1 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1 | 0.53 | 44.0 | 3.41e-01 | 100.0% | 73.3% |
| 5057417 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.60e-01 | 100.0% | 74.7% |
| 3987436 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.51 | 41.0 | 2.43e-01 | 97.8% | 34.6% |
| 3981710 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.51 | 42.0 | 2.76e-01 | 100.0% | 23.3% |
| 4022346 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.50 | 42.0 | 2.58e-01 | 100.0% | 37.6% |