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IMGVR_UViG_3300025322_000234-3300025322-Ga0209641_1000309214
Arc-VirIMGVR_UViG_3300025322_000234-3300025322-Ga0209641_1000309214
Identity
- Kingdom:
- archaea
Quality
93.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-94
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03819.23 best | MazG | 36.0 | 9.20e-09 | 80.2% | 86.5% |
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.87 | 82.0 | 7.50e-01 | 100.0% | 89.4% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.84 | 69.0 | 7.23e-01 | 91.2% | 95.1% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.84 | 74.0 | 7.31e-01 | 95.6% | 95.9% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 56.0 | 6.06e-01 | 72.5% | 81.8% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 54.0 | 6.27e-01 | 71.4% | 95.4% |
| 1jkvA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.80 | 56.0 | 4.27e-01 | 72.5% | 72.6% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.79 | 56.0 | 4.95e-01 | 73.6% | 60.0% |
| 3craA02 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.79 | 72.0 | 6.41e-01 | 100.0% | 86.7% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.77 | 65.0 | 6.72e-01 | 90.1% | 96.6% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 53.0 | 4.71e-01 | 71.4% | 62.5% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.77 | 70.0 | 5.98e-01 | 100.0% | 81.1% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.75 | 52.0 | 4.31e-01 | 72.5% | 55.4% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 59.0 | 5.97e-01 | 83.5% | 87.9% |
| 1yvwA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.74 | 67.0 | 6.70e-01 | 97.8% | 98.9% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.73 | 66.0 | 6.15e-01 | 100.0% | 97.3% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.71 | 51.0 | 4.20e-01 | 73.6% | 75.9% |
| 8cdaB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.71 | 50.0 | 4.12e-01 | 71.4% | 56.0% |
| 4ivfA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 50.0 | 4.62e-01 | 73.6% | 84.5% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 49.0 | 4.68e-01 | 71.4% | 84.6% |
| 5nl6B01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 47.0 | 4.31e-01 | 70.3% | 73.6% |
| 1wrdA00 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 46.0 | 4.55e-01 | 70.3% | 73.5% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.68 | 47.0 | 4.84e-01 | 71.4% | 82.1% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.67 | 51.0 | 3.64e-01 | 79.1% | 70.2% |
| 3urzA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 48.0 | 3.72e-01 | 76.9% | 41.6% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 44.0 | 4.48e-01 | 71.4% | 87.0% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 45.0 | 4.90e-01 | 75.8% | 97.3% |
| 3vkgB03 | 1.20.58.1120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 | 0.63 | 44.0 | 3.71e-01 | 72.5% | 52.6% |
| 1nfvA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 46.0 | 3.77e-01 | 83.5% | 95.3% |
| 3fm5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 43.0 | 3.89e-01 | 78.0% | 83.1% |
| 1qlbA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.58 | 40.0 | 3.75e-01 | 72.5% | 57.6% |
| 2wdqA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.58 | 40.0 | 3.74e-01 | 72.5% | 57.3% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.57 | 41.0 | 4.38e-01 | 74.7% | 100.0% |
| 1zoyA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.57 | 39.0 | 3.61e-01 | 70.3% | 56.4% |
| 3ay5A01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.56 | 46.0 | 4.03e-01 | 89.0% | 65.4% |
| 2oauA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 41.0 | 3.94e-01 | 80.2% | 76.5% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4445940 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.88 | 59.0 | 6.63e-01 | 72.5% | 86.3% |
| 4031537 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.87 | 82.0 | 7.92e-01 | 100.0% | 93.0% |
| 5029994 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.83 | 56.0 | 6.54e-01 | 72.5% | 96.9% |
| 5029513 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.81 | 56.0 | 6.30e-01 | 73.6% | 91.4% |
| 3223368 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.81 | 61.0 | 5.03e-01 | 79.1% | 83.2% |
| 4945676 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.80 | 71.0 | 7.14e-01 | 98.9% | 94.4% |
| 5073502 | 159.1.1.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 | 0.80 | 70.0 | 7.10e-01 | 98.9% | 94.4% |
| 3565979 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.80 | 58.0 | 4.16e-01 | 74.7% | 47.0% |
| 4366433 | 159.1.2.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PRA-PH | 0.79 | 73.0 | 7.14e-01 | 97.8% | 95.9% |
| 4055485 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.79 | 55.0 | 6.17e-01 | 72.5% | 92.9% |
| 5054107 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.79 | 55.0 | 3.95e-01 | 72.5% | 36.7% |
| 3217153 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.78 | 59.0 | 4.89e-01 | 78.0% | 87.3% |
| 4562960 | 159.1.2.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PRA-PH | 0.78 | 72.0 | 6.88e-01 | 100.0% | 89.5% |
| 4934026 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.77 | 53.0 | 6.13e-01 | 71.4% | 98.5% |
| 4131 | 159.1.2.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PRA-PH | 0.77 | 65.0 | 6.72e-01 | 90.1% | 96.6% |
| 4104683 | 159.1.2.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PRA-PH | 0.77 | 71.0 | 6.73e-01 | 100.0% | 88.6% |
| 2106300 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.76 | 56.0 | 5.05e-01 | 76.9% | 63.9% |
| 4154463 | 159.1.2.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PRA-PH | 0.76 | 70.0 | 6.82e-01 | 100.0% | 94.0% |
| 3660717 | 192.1.1.22 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › BPS1 | 0.76 | 53.0 | 5.72e-01 | 72.5% | 86.3% |
| 3929097 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.75 | 52.0 | 4.61e-01 | 71.4% | 60.8% |
| 3284805 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.75 | 53.0 | 4.65e-01 | 73.6% | 98.5% |
| 3922588 | 3559.1.1.40 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Bap31 | 0.75 | 53.0 | 4.26e-01 | 72.5% | 65.5% |
| 3507551 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.74 | 56.0 | 5.53e-01 | 78.0% | 92.6% |
| 3576710 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.73 | 52.0 | 5.35e-01 | 74.7% | 77.6% |
| 3754265 | 603.1.1.187 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DNA_repr_REX1B | 0.72 | 52.0 | 5.26e-01 | 74.7% | 93.3% |
| 3591664 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.70 | 51.0 | 3.90e-01 | 75.8% | 39.5% |
| 4977923 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.70 | 50.0 | 4.11e-01 | 74.7% | 77.5% |
| 5039558 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 53.0 | 4.67e-01 | 82.4% | 95.6% |
| 3582396 | 109.4.1.1302 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30363 | 0.68 | 53.0 | 4.16e-01 | 85.7% | 64.0% |
| None | — | 0.67 | 46.0 | 4.08e-01 | 70.3% | 86.2% | |
| 3724003 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.67 | 47.0 | 4.57e-01 | 71.4% | 73.0% |
| 3845925 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 46.0 | 4.20e-01 | 71.4% | 69.6% |
| 3884763 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 46.0 | 4.00e-01 | 72.5% | 71.7% |
| 3510684 | 109.4.1.1716 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G_like, MIF4G_like_2 | 0.67 | 54.0 | 3.40e-01 | 87.9% | 84.7% |
| 3447988 | 603.1.1.102 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF3537 | 0.65 | 51.0 | 3.95e-01 | 82.4% | 87.7% |
| 3734058 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.63 | 46.0 | 4.40e-01 | 75.8% | 75.2% |
| 3586442 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.62 | 44.0 | 4.17e-01 | 73.6% | 70.0% |
| 4223104 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.60 | 49.0 | 4.37e-01 | 89.0% | 83.8% |
| 3468013 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.60 | 44.0 | 4.31e-01 | 78.0% | 83.0% |
| 3458081 | 109.4.1.543 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › efThoc1 | 0.59 | 45.0 | 3.59e-01 | 82.4% | 53.3% |
| 4963648 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.55 | 45.0 | 2.87e-01 | 91.2% | 90.8% |