←Back to structures
IMGVR_UViG_3300025322_000234-3300025322-Ga0209641_1000309219
Arc-VirIMGVR_UViG_3300025322_000234-3300025322-Ga0209641_1000309219
Identity
- Kingdom:
- archaea
Quality
70.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-60
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qi9A00 | 1.10.606.10 | Mainly Alpha › Orthogonal Bundle › Vanadium-containing Chloroperoxidase; domain 2 › Vanadium-containing Chloroperoxidase, domain 2 | 0.78 | 45.0 | 2.54e-01 | 91.1% | 5.8% |
| 2jmbA00 | 2.40.128.290 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 | 0.68 | 42.0 | 3.76e-01 | 82.1% | 43.0% |
| 2gsbA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 41.0 | 3.64e-01 | 71.4% | 76.2% |
| 4h63Q04 | 3.90.1150.120 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.57 | 42.0 | 3.31e-01 | 85.7% | 37.9% |
| 3cawA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 46.0 | 3.97e-01 | 91.1% | 91.2% |
| 1wv3A01 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.57 | 41.0 | 3.82e-01 | 80.4% | 76.3% |
| 1wxcB01 | 3.30.1880.10 | Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like | 0.56 | 45.0 | 4.41e-01 | 94.6% | 80.6% |
| 4zgfA00 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 45.0 | 3.54e-01 | 98.2% | 55.3% |
| 3i9v700 | 3.30.920.80 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15 | 0.53 | 37.0 | 2.92e-01 | 75.0% | 85.0% |
| 1pqzA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.53 | 45.0 | 3.48e-01 | 100.0% | 88.3% |
| 3lodA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 39.0 | 2.96e-01 | 82.1% | 73.8% |
| 4u0wA02 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.52 | 41.0 | 3.12e-01 | 96.4% | 59.0% |
| 6qpwA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.07e-01 | 91.1% | 33.3% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.51 | 40.0 | 3.49e-01 | 87.5% | 65.2% |
| 1mzgB00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.50 | 42.0 | 3.21e-01 | 98.2% | 71.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4002956 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 41.0 | 3.25e-01 | 87.5% | 30.4% |
| 4012803 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 47.0 | 2.99e-01 | 87.5% | 69.0% |
| 3755862 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 40.0 | 3.46e-01 | 87.5% | 41.1% |
| 4937746 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 46.0 | 3.68e-01 | 85.7% | 52.2% |
| 3731706 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.56 | 47.0 | 2.89e-01 | 98.2% | 24.9% |
| 3968490 | 2484.6.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR › ExbD | 0.56 | 40.0 | 3.45e-01 | 71.4% | 70.6% |
| 3393343 | 2003.1.2.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like | 0.55 | 38.0 | 2.40e-01 | 73.2% | 75.0% |
| 3485364 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 30.0 | 3.15e-01 | 80.4% | 56.0% |
| 5011782 | 244.2.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim | 0.55 | 45.0 | 3.69e-01 | 98.2% | 73.9% |
| 3929628 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 36.0 | 2.88e-01 | 73.2% | 96.2% |
| 3595461 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 42.0 | 3.42e-01 | 94.6% | 89.6% |
| 3743240 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.50 | 43.0 | 3.96e-01 | 100.0% | 78.7% |