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IMGVR_UViG_3300025322_001243-3300025322-Ga0209641_100221341
Arc-VirIMGVR_UViG_3300025322_001243-3300025322-Ga0209641_100221341
Identity
- Kingdom:
- archaea
Quality
94.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-50
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02826.26 best | 2-Hacid_dh_C | 29.5 | 6.40e-07 | 95.9% | 23.6% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hkuA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.86 | 79.0 | 5.13e-01 | 100.0% | 27.3% |
| 3pp8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.85 | 77.0 | 5.08e-01 | 100.0% | 28.4% |
| 2eklA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.83 | 74.0 | 4.88e-01 | 100.0% | 28.3% |
| 4njmA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.78 | 69.0 | 4.73e-01 | 100.0% | 29.5% |
| 6p3xB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.72 | 63.0 | 4.29e-01 | 100.0% | 33.3% |
| 4wd3A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 58.0 | 4.38e-01 | 100.0% | 39.2% |
| 2f9fA00 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.67 | 57.0 | 4.00e-01 | 100.0% | 34.9% |
| 1ytlA00 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.65 | 53.0 | 3.80e-01 | 100.0% | 29.7% |
| 2d6fA03 | 3.40.50.40 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 54.0 | 4.03e-01 | 100.0% | 42.8% |
| 2wmfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 53.0 | 3.27e-01 | 100.0% | 18.6% |
| 6nkoC00 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.62 | 48.0 | 3.37e-01 | 100.0% | 23.7% |
| 1ursB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 47.0 | 3.29e-01 | 100.0% | 64.0% |
| 2dxnA02 | 3.30.750.180 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › GpdQ, beta-strand dimerisation domain | 0.57 | 45.0 | 3.56e-01 | 100.0% | 61.1% |
| 1r5aA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 38.0 | 3.31e-01 | 73.5% | 44.9% |
| 4ccdA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 44.0 | 3.15e-01 | 100.0% | 27.8% |
| 4rr9A01 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.54 | 43.0 | 3.35e-01 | 100.0% | 76.1% |
| 5a4uA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 36.0 | 3.09e-01 | 73.5% | 40.7% |
| 4q7aA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 43.0 | 2.83e-01 | 100.0% | 57.7% |
| 1vheA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 39.0 | 2.64e-01 | 100.0% | 59.3% |
| 7ywdB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 34.0 | 2.90e-01 | 75.5% | 37.2% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4886087 | 2003.1.11.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › 2-Hacid_dh_C | 0.90 | 84.0 | 5.57e-01 | 100.0% | 29.4% |
| 4481335 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.90 | 83.0 | 5.46e-01 | 100.0% | 27.8% |
| None | — | 0.89 | 82.0 | 5.35e-01 | 100.0% | 28.1% | |
| 3722335 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.88 | 80.0 | 5.21e-01 | 100.0% | 26.7% |
| 3259523 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.88 | 80.0 | 5.20e-01 | 100.0% | 26.7% |
| 3291628 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.88 | 80.0 | 5.22e-01 | 100.0% | 27.4% |
| 5025271 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.86 | 78.0 | 5.18e-01 | 100.0% | 27.2% |
| 4944613 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.85 | 78.0 | 5.14e-01 | 100.0% | 27.6% |
| None | — | 0.85 | 78.0 | 5.09e-01 | 100.0% | 26.8% | |
| 4046711 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.85 | 78.0 | 4.76e-01 | 100.0% | 19.2% |
| 3171176 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.85 | 78.0 | 4.83e-01 | 100.0% | 21.2% |
| 3783387 | 2003.1.1.159 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C, F420_oxidored | 0.85 | 77.0 | 4.99e-01 | 100.0% | 26.2% |
| 3336301 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.84 | 77.0 | 4.94e-01 | 100.0% | 24.3% |
| 3597819 | 2003.1.1.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C | 0.84 | 77.0 | 4.95e-01 | 100.0% | 27.0% |
| 2127862 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.69 | 58.0 | 4.51e-01 | 100.0% | 43.1% |
| 3841542 | 2004.1.1.432 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 | 0.63 | 53.0 | 3.75e-01 | 100.0% | 30.9% |
| 3627995 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.63 | 51.0 | 2.98e-01 | 100.0% | 12.8% |
| 3597621 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.62 | 51.0 | 3.08e-01 | 100.0% | 23.3% |
| 3964166 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.59 | 47.0 | 3.38e-01 | 100.0% | 28.3% |
| 4202525 | 7512.1.1.10 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28 | 0.59 | 48.0 | 3.37e-01 | 100.0% | 25.8% |
| 4846657 | 207.1.1.157 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF29252 | 0.59 | 46.0 | 4.57e-01 | 95.9% | 87.0% |
| 5010300 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.56 | 45.0 | 4.11e-01 | 100.0% | 88.0% |
| 4947631 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.56 | 45.0 | 2.92e-01 | 100.0% | 29.7% |