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IMGVR_UViG_3300025322_001371-3300025322-Ga0209641_100078889

Arc-Vir

IMGVR_UViG_3300025322_001371-3300025322-Ga0209641_100078889

Quality

84.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-240
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01183.27 best Glyco_hydro_25 34.2 4.60e-08 89.8% 90.0%
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5a6sA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.89 70.0 7.76e-01 100.0% 97.4%
4kruA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.89 74.0 7.75e-01 100.0% 93.5%
2nw0A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.84 65.0 7.24e-01 98.3% 98.4%
2wagA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.83 70.0 7.35e-01 100.0% 94.5%
4jz5A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.83 70.0 7.53e-01 100.0% 99.5%
1jfxA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.83 73.0 7.61e-01 100.0% 98.2%
1sfsA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.75 65.0 6.88e-01 98.7% 99.5%
2y2wC02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.70 63.0 5.41e-01 97.0% 98.9%
1sfjB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 51.0 5.12e-01 86.8% 76.8%
2hisA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 59.0 5.34e-01 95.3% 91.7%
3l23A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.65 59.0 5.54e-01 95.7% 97.5%
4acyA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 59.0 5.21e-01 98.3% 99.1%
3ktcA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.64 58.0 5.16e-01 96.2% 86.7%
4ijrA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.64 57.0 5.12e-01 95.3% 84.1%
7wmzC01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.64 58.0 5.42e-01 95.7% 99.3%
1mzhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 54.0 5.56e-01 96.2% 92.4%
1c3fA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.64 58.0 5.62e-01 97.4% 97.4%
1lt7B00 3.20.20.330 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain 0.64 58.0 5.25e-01 97.4% 83.5%
3bleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 57.0 5.19e-01 95.3% 79.2%
1n7kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 54.0 5.49e-01 95.7% 90.2%
6y9tB01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 58.0 4.85e-01 98.7% 98.7%
2d73A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 57.0 5.14e-01 97.0% 94.1%
3wqoA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.63 56.0 5.36e-01 95.3% 95.6%
5ot1A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 57.0 4.91e-01 97.0% 96.9%
2q02A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.62 56.0 5.36e-01 96.2% 97.4%
2r8wA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 55.0 5.05e-01 93.6% 90.2%
3d3aA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 56.0 5.34e-01 98.3% 94.5%
3qy7A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.61 56.0 5.51e-01 98.7% 93.5%
1qwgA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 55.0 5.40e-01 96.2% 90.4%
1kcxA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.61 56.0 4.79e-01 99.6% 87.7%
1ivnA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.60 43.0 4.81e-01 95.7% 94.4%
1ccwB01 3.20.20.240 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase 0.60 54.0 4.44e-01 96.2% 70.5%
4rshA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.60 43.0 4.89e-01 95.3% 97.1%
3ayvD00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.59 53.0 5.26e-01 94.9% 96.3%
3lufB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 31.0 4.16e-01 99.6% 97.6%
3cu2A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 50.0 5.07e-01 94.9% 93.6%
3nntA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 51.0 5.00e-01 96.2% 89.5%
2yr1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 50.0 4.90e-01 97.0% 87.5%
3n4eA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.56 49.0 4.78e-01 96.6% 84.8%
3qkwB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 40.0 4.49e-01 83.0% 98.3%
4by3A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 50.0 4.38e-01 100.0% 77.6%
1sulB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 40.0 4.40e-01 99.6% 89.7%
2a5hA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 48.0 4.53e-01 96.2% 79.4%
3iq0A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 42.0 3.86e-01 82.1% 100.0%
7v58A01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 38.0 3.87e-01 100.0% 72.5%
1bwpA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.53 43.0 4.57e-01 95.3% 95.3%
1e5dA01 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.53 33.0 4.07e-01 96.6% 100.0%
2q9uA02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.52 33.0 4.05e-01 95.3% 100.0%
2hsjD00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.52 43.0 4.50e-01 94.0% 94.4%
7u7hA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 38.0 3.91e-01 100.0% 78.0%
4cidA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 4.21e-01 83.0% 99.1%
3kkiA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 36.0 3.66e-01 100.0% 71.6%
6se1A01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.50 44.0 4.37e-01 93.2% 100.0%
3io3A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 37.0 3.80e-01 87.2% 77.4%
3ehdA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 33.0 4.03e-01 96.2% 100.0%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1290373 2002.1.1.55 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 0.89 74.0 7.89e-01 100.0% 96.6%
3283842 2002.1.1.55 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 0.87 74.0 7.93e-01 99.6% 100.0%
4009663 2002.1.1.55 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 0.86 72.0 7.30e-01 100.0% 86.4%
5064016 2002.1.1.55 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 0.86 71.0 7.74e-01 98.3% 100.0%
3244695 2002.1.1.290 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 0.84 71.0 7.60e-01 95.7% 100.0%
1284139 2002.1.1.55 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 0.84 70.0 7.55e-01 100.0% 99.5%
139515 2002.1.1.55 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 0.84 66.0 7.30e-01 99.6% 99.5%
135340 2002.1.1.55 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 0.83 70.0 7.35e-01 100.0% 94.5%
3215997 2002.1.1.290 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 0.83 73.0 7.46e-01 97.9% 94.7%
3288451 2002.1.1.55 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 0.82 71.0 7.22e-01 100.0% 91.3%
3038269 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.67 62.0 5.74e-01 97.4% 96.5%
3684756 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.67 60.0 5.32e-01 95.3% 98.2%
3727363 2002.1.1.276 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF29664 0.65 58.0 5.59e-01 94.9% 94.1%
3388919 2002.1.1.185 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_99 0.65 60.0 5.22e-01 99.1% 99.4%
3265916 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.65 59.0 5.15e-01 96.6% 95.1%
4963878 2002.1.1.13 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.65 59.0 5.44e-01 96.2% 90.3%
5031774 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.64 59.0 5.49e-01 99.6% 99.7%
3234948 2002.1.1.13 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.64 57.0 5.37e-01 95.7% 85.6%
4957755 2002.1.1.13 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.63 57.0 5.39e-01 96.2% 88.2%
5063001 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.63 58.0 5.46e-01 97.4% 88.6%
95373 2002.1.1.100 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA 0.62 52.0 5.36e-01 95.7% 91.6%
1158347 2002.1.1.186 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Melibiase_2 0.62 57.0 5.27e-01 97.4% 96.6%
4134169 2002.1.1.37 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim 0.62 53.0 5.57e-01 97.4% 97.2%
4954274 2002.1.1.13 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.62 56.0 5.53e-01 95.3% 90.0%
1102935 2002.1.1.176 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase 0.62 55.0 5.40e-01 94.0% 90.4%
4079413 2002.1.1.41 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase 0.62 57.0 5.06e-01 100.0% 95.8%
3904774 2002.1.1.274 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 0.61 56.0 4.44e-01 99.6% 76.1%
5001136 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.61 55.0 5.38e-01 95.3% 96.4%
3270326 65.1.1.3 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Amidohydro_1 0.61 56.0 4.41e-01 100.0% 74.7%
5029560 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.61 55.0 5.12e-01 96.2% 88.6%
3163602 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.61 52.0 5.10e-01 91.5% 89.2%
5057040 2002.1.1.66 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.61 49.0 5.11e-01 87.2% 90.0%
3502938 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.60 55.0 4.43e-01 99.6% 68.3%
4928980 2002.1.1.100 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › ComA 0.60 54.0 5.23e-01 96.2% 88.1%
3951935 2002.1.1.36 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind 0.59 53.0 4.89e-01 97.9% 86.0%
3574305 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.58 54.0 4.36e-01 100.0% 76.4%
5032325 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 39.0 4.35e-01 98.3% 84.9%
None 0.58 53.0 4.51e-01 100.0% 83.8%
4949018 2002.1.1.450 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › LAM_C 0.58 48.0 4.51e-01 85.5% 73.6%
3638250 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.58 52.0 4.91e-01 97.4% 87.7%
5065427 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.57 50.0 4.44e-01 91.9% 75.4%
4033323 2002.1.1.167 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHOase 0.57 53.0 4.37e-01 100.0% 84.3%
4334568 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.57 51.0 4.91e-01 97.0% 95.3%
5061139 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.56 50.0 4.36e-01 95.3% 81.7%
5061803 2002.1.1.66 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.56 50.0 5.08e-01 95.3% 95.7%
4302494 2002.1.1.9 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.56 52.0 4.94e-01 97.9% 90.0%
5075443 2002.1.1.66 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.56 49.0 4.96e-01 96.2% 93.6%
3590973 2007.15.1.2 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr 0.56 33.0 4.19e-01 98.3% 95.2%
4619533 2003.6.1.3 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK 0.55 46.0 4.31e-01 86.8% 97.5%
5081020 2002.1.1.66 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.55 48.0 4.85e-01 96.2% 93.5%
5064421 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.55 37.0 4.44e-01 100.0% 100.0%
4997827 2007.2.1.6 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 0.54 37.0 3.88e-01 98.3% 73.9%
3659515 2002.1.1.8 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase 0.54 48.0 4.61e-01 96.6% 97.1%
3249123 2004.1.1.230 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Tsr1_G-like 0.54 38.0 4.37e-01 99.6% 97.1%
5045711 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.52 33.0 4.02e-01 96.6% 98.0%
5004060 7592.1.1.3 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N 0.52 29.0 3.66e-01 81.3% 91.9%
4970640 2007.1.1.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.51 41.0 3.94e-01 83.8% 97.5%
3627955 2004.1.1.36 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N 0.51 42.0 3.89e-01 85.5% 94.9%
4935184 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.50 42.0 4.17e-01 88.5% 98.8%
3602914 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.50 32.0 3.91e-01 97.0% 99.3%