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IMGVR_UViG_3300025322_002131-3300025322-Ga0209641_100020413
Arc-VirIMGVR_UViG_3300025322_002131-3300025322-Ga0209641_100020413
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-124
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2epbA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 36.0 | 4.32e-01 | 83.3% | 79.4% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 33.0 | 3.76e-01 | 88.2% | 66.7% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 43.0 | 4.29e-01 | 100.0% | 69.9% |
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 43.0 | 4.22e-01 | 100.0% | 66.7% |
| 3kf8A00 | 2.40.50.1040 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 48.0 | 3.82e-01 | 100.0% | 43.5% |
| 3qz4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 33.0 | 2.40e-01 | 98.0% | 17.6% |
| 1fguB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 45.0 | 4.47e-01 | 100.0% | 81.9% |
| 4damC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 43.0 | 4.42e-01 | 100.0% | 83.0% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 46.0 | 4.46e-01 | 100.0% | 81.7% |
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 31.0 | 3.71e-01 | 97.1% | 87.5% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.54 | 32.0 | 3.66e-01 | 87.3% | 83.1% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 31.0 | 3.38e-01 | 98.0% | 69.6% |
| 1cyyA02 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.54 | 37.0 | 3.53e-01 | 83.3% | 59.2% |
| 4cgyA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.52 | 38.0 | 3.56e-01 | 95.1% | 61.7% |
| 2gaiA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.52 | 38.0 | 3.57e-01 | 95.1% | 63.4% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 31.0 | 3.62e-01 | 90.2% | 85.9% |
| 1luiA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 36.0 | 3.59e-01 | 86.3% | 68.5% |
| 2p38A01 | 3.10.450.220 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 32.0 | 3.37e-01 | 97.1% | 71.1% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 30.0 | 3.51e-01 | 99.0% | 84.7% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4602887 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 48.0 | 5.62e-01 | 100.0% | 86.5% |
| 4995179 | 236.3.1.1 ↗ | beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 | 0.72 | 46.0 | 4.99e-01 | 100.0% | 77.6% |
| 3742215 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.69 | 48.0 | 5.14e-01 | 100.0% | 82.2% |
| 5059673 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 47.0 | 4.75e-01 | 100.0% | 73.0% |
| 5068667 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.65 | 45.0 | 4.54e-01 | 100.0% | 69.5% |
| 5064366 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 45.0 | 4.59e-01 | 100.0% | 73.0% |
| 4985567 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 46.0 | 4.73e-01 | 100.0% | 77.9% |
| 5019817 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 45.0 | 4.46e-01 | 100.0% | 67.3% |
| 3961045 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 44.0 | 4.47e-01 | 100.0% | 71.0% |
| 4964974 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 45.0 | 4.46e-01 | 100.0% | 69.5% |
| 5040544 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 45.0 | 4.37e-01 | 100.0% | 66.4% |
| 5068666 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 45.0 | 4.40e-01 | 100.0% | 67.3% |
| 5001821 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.64 | 45.0 | 4.47e-01 | 100.0% | 70.5% |
| 4930785 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 44.0 | 4.34e-01 | 100.0% | 66.4% |
| 4405445 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 34.0 | 4.00e-01 | 96.1% | 74.3% |
| 5025918 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.63 | 44.0 | 4.44e-01 | 100.0% | 70.5% |
| 5082489 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 44.0 | 4.38e-01 | 100.0% | 69.5% |
| 5080580 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 44.0 | 4.36e-01 | 100.0% | 69.5% |
| 4946190 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 34.0 | 3.45e-01 | 97.1% | 51.4% |
| 5069581 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 47.0 | 4.61e-01 | 100.0% | 73.6% |
| 168731 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 43.0 | 4.37e-01 | 100.0% | 73.5% |
| 4964975 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 43.0 | 4.42e-01 | 100.0% | 74.0% |
| 3366703 | 2.1.1.157 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB2 | 0.61 | 49.0 | 4.42e-01 | 100.0% | 63.7% |
| 5035745 | 2.1.1.123 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 | 0.61 | 45.0 | 4.54e-01 | 100.0% | 76.2% |
| 4958514 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 42.0 | 4.33e-01 | 100.0% | 75.0% |
| 5037301 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.58 | 42.0 | 4.36e-01 | 100.0% | 81.9% |
| 3923839 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 32.0 | 3.77e-01 | 100.0% | 78.6% |
| 3250605 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 49.0 | 4.61e-01 | 97.1% | 94.4% |
| 4941925 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 34.0 | 4.07e-01 | 95.1% | 96.9% |
| 4988038 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 45.0 | 4.31e-01 | 100.0% | 81.7% |
| 3701914 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 36.0 | 3.71e-01 | 78.4% | 75.8% |
| 5036880 | 330.1.1.35 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › LeuA_dimer | 0.52 | 31.0 | 3.58e-01 | 98.0% | 85.7% |
| 4541284 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 31.0 | 2.99e-01 | 99.0% | 51.7% |
| 3499841 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.50 | 33.0 | 3.48e-01 | 100.0% | 74.4% |