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IMGVR_UViG_3300025326_000018-3300025326-Ga0209342_1000012721
Arc-VirIMGVR_UViG_3300025326_000018-3300025326-Ga0209342_1000012721
Identity
- Kingdom:
- archaea
Quality
62.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 81-170
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10145.15 best | PhageMin_Tail | 37.4 | 3.50e-09 | 64.4% | 28.4% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bl2A00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.64 | 46.0 | 3.87e-01 | 75.6% | 69.9% |
| 3vpxB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 47.0 | 3.69e-01 | 78.9% | 95.5% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 51.0 | 4.71e-01 | 85.6% | 93.0% |
| 2k3oA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.62 | 43.0 | 3.89e-01 | 72.2% | 95.3% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 48.0 | 4.26e-01 | 84.4% | 83.3% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 46.0 | 4.34e-01 | 83.3% | 90.2% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 46.0 | 4.01e-01 | 84.4% | 77.9% |
| 4bemJ00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.59 | 48.0 | 3.90e-01 | 91.1% | 68.0% |
| 3nqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.58 | 46.0 | 3.94e-01 | 86.7% | 74.0% |
| 2ogiB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.58 | 47.0 | 3.68e-01 | 88.9% | 78.8% |
| 1td6A03 | 1.10.472.40 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 | 0.56 | 44.0 | 4.42e-01 | 85.6% | 83.7% |
| 2hg2A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 44.0 | 3.18e-01 | 93.3% | 52.4% |
| 5vbfA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 43.0 | 3.08e-01 | 93.3% | 46.9% |
| 2igsA00 | 1.10.3690.10 | Mainly Alpha › Orthogonal Bundle › PA2222-like fold › PA2222-like domain | 0.52 | 44.0 | 3.43e-01 | 96.7% | 93.5% |
| 2f2gA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.52 | 41.0 | 3.16e-01 | 87.8% | 79.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032310 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.94 | 88.0 | 7.19e-01 | 98.9% | 58.7% |
| 3981280 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.87 | 81.0 | 6.76e-01 | 100.0% | 62.8% |
| 3941716 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.84 | 74.0 | 6.47e-01 | 94.4% | 66.9% |
| 4030882 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.76 | 66.0 | 5.03e-01 | 96.7% | 42.4% |
| 3726125 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 48.0 | 4.85e-01 | 96.7% | 84.4% |
| 4242802 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.61 | 46.0 | 3.99e-01 | 82.2% | 70.7% |
| 4297829 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.61 | 47.0 | 3.63e-01 | 83.3% | 69.0% |
| 3591771 | 611.8.1.0 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | 0.58 | 44.0 | 3.74e-01 | 80.0% | 96.7% |
| 4928541 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.58 | 30.0 | 2.62e-01 | 91.1% | 30.4% |
| 3587137 | 1174.1.1.1 ↗ | alpha complex topology › Potassium channel TMEM175 › Potassium channel TMEM175 › Potassium channel TMEM175 › TMEM175 | 0.57 | 46.0 | 3.63e-01 | 86.7% | 63.7% |
| 3927217 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.57 | 46.0 | 3.64e-01 | 88.9% | 60.0% |
| 3447104 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 47.0 | 4.58e-01 | 97.8% | 85.0% |
| 4965872 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.57 | 43.0 | 4.17e-01 | 82.2% | 92.0% |
| 3407685 | 5038.2.1.1 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG | 0.56 | 43.0 | 3.83e-01 | 83.3% | 91.1% |
| 3391293 | 101.1.10.13 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF3452 | 0.56 | 50.0 | 4.58e-01 | 100.0% | 90.0% |
| 3748911 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 45.0 | 3.14e-01 | 100.0% | 49.7% |
D2
medium
residues 171-342
Domain cluster:
rep: NC_048166.1__YP_009820345.1__HOV23_gp014__00014__D490-699
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10145.15 best | PhageMin_Tail | 109.5 | 3.00e-31 | 81.4% | 60.7% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p9dE01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.53 | 41.0 | 3.60e-01 | 89.5% | 53.2% |
| 6ks6Z01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.53 | 41.0 | 3.56e-01 | 89.5% | 52.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030882 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.94 | 91.0 | 8.39e-01 | 100.0% | 82.9% |
| 3945172 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.73 | 55.0 | 5.12e-01 | 98.8% | 63.8% |
| 4032310 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.64 | 49.0 | 5.21e-01 | 100.0% | 89.3% |
| 3700727 | 601.29.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › TM1646-like › TM1646-like | 0.50 | 24.0 | 2.68e-01 | 93.0% | 51.9% |
D3
medium
residues 343-401
D4
medium
residues 402-475
D5
medium
residues 509-624
D6
medium
residues 711-769