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IMGVR_UViG_3300025326_000018-3300025326-Ga0209342_1000012765

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300025326_000018-3300025326-Ga0209342_1000012765 ↗
Kingdom:: archaea

Quality

80.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 214-336

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2konA00	3.30.160.350	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.57	38.0	4.40e-01	74.8%	100.0%
1ukxA00	3.10.110.10	Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme	0.55	47.0	4.56e-01	93.5%	88.3%
4m4pA02	2.60.40.1770	Mainly Beta › Sandwich › Immunoglobulin-like › ephrin a2 ectodomain	0.55	28.0	3.66e-01	76.4%	98.3%
3o6qA02	3.30.70.2720	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.54	32.0	3.32e-01	82.9%	60.5%
3nqhA01	2.115.10.20	Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43	0.54	46.0	3.50e-01	93.5%	88.1%
4ntqA00	3.10.380.20	Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain	0.53	32.0	3.96e-01	81.3%	96.1%
3tqmA00	3.30.160.100	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like	0.52	33.0	3.75e-01	82.1%	86.7%
6v4xC01	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.52	32.0	3.45e-01	72.4%	74.0%
1v0fA02	2.120.10.10	Mainly Beta › 6 Propeller › Neuraminidase ›	0.50	43.0	3.15e-01	95.1%	90.3%
2lf2A00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.50	44.0	3.89e-01	99.2%	66.9%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3283509	9.4.1.0 ↗	beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains	0.63	41.0	4.33e-01	97.6%	73.4%
3974132	4152.2.1.0 ↗	a+b two layers › Shew3726-like › Uncharacterized protein CV_2116 › Uncharacterized protein CV_2116	0.60	37.0	4.52e-01	73.2%	100.0%
4991720	3692.1.1.0 ↗	a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain	0.60	41.0	4.11e-01	88.6%	68.0%
4846313	1075.1.1.2 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › LptF_LptG	0.58	33.0	3.75e-01	87.0%	74.2%
3571568	9.15.1.1 ↗	beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD	0.57	45.0	4.29e-01	89.4%	71.0%
3164479	3523.1.1.1 ↗	beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG	0.56	35.0	3.89e-01	79.7%	78.9%
3964197	213.1.1.64 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF535	0.53	48.0	3.75e-01	100.0%	73.1%
5012828	5.1.4.40 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2	0.51	45.0	3.23e-01	97.6%	95.3%
3985036	213.1.1.64 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF535	0.51	45.0	3.61e-01	100.0%	79.2%
3163809	213.1.1.64 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF535	0.51	45.0	3.71e-01	100.0%	66.5%
3629205	5.1.4.147 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N	0.50	42.0	3.04e-01	90.2%	76.1%

D2 medium residues 1-94_151-206

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2dq0A01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.58	26.0	3.07e-01	96.7%	58.9%
3ez0C00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.55	39.0	3.50e-01	73.3%	86.1%
4dylA02	1.10.287.160	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat	0.54	28.0	3.49e-01	96.0%	79.8%
4xpwA00	1.20.120.50	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like	0.54	34.0	3.62e-01	74.0%	71.0%
2kbwA01	1.10.437.10	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like	0.54	33.0	3.36e-01	72.7%	60.1%
1t98A02	1.20.58.590	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain	0.51	39.0	3.85e-01	79.3%	94.5%
3ce2A03	1.10.1370.20	Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › Oligoendopeptidase f, C-terminal domain	0.50	36.0	2.73e-01	72.7%	63.1%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4029195	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.55	41.0	3.50e-01	78.0%	66.8%
3346760	604.6.1.0 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain	0.50	37.0	3.87e-01	80.7%	84.4%

D3 medium residues 95-150_343-400

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3anpB00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.50	36.0	3.05e-01	72.8%	87.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4022212	109.4.1.2612 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, MMS19_C, HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IMB1, TPR_IPO5	0.51	38.0	2.23e-01	78.1%	12.8%