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IMGVR_UViG_3300025326_000018-3300025326-Ga0209342_100001279

Arc-Vir

IMGVR_UViG_3300025326_000018-3300025326-Ga0209342_100001279

Quality

70.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 57-143
PDB
D2 high residues 306-431
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14550.12 best Peptidase_S78_2 27.3 5.00e-06 99.2% 75.4%
D3 medium residues 149-209
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23474.2 best Acb1 40.4 3.50e-10 86.9% 33.1%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o8bB01 3.40.1170.10 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I 0.56 46.0 3.47e-01 96.7% 37.1%
3njzA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 43.0 2.72e-01 90.2% 78.4%
3lzkB00 3.90.850.10 Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain 0.51 37.0 2.42e-01 80.3% 53.7%
2v9yB02 3.90.650.10 Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain 0.50 37.0 2.82e-01 85.2% 83.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3577034 12.1.1.23 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.59 48.0 3.84e-01 96.7% 82.9%
3269573 12.1.1.1 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_39 0.52 42.0 3.40e-01 100.0% 86.2%
3686677 207.1.1.243 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF7730 0.52 40.0 2.90e-01 91.8% 48.4%
4287226 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.51 36.0 2.41e-01 77.0% 18.0%
D4 medium residues 210-305
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23474.2 best Acb1 85.9 3.20e-24 92.7% 55.2%