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IMGVR_UViG_3300025326_000018-3300025326-Ga0209342_1000012793

Arc-Vir

IMGVR_UViG_3300025326_000018-3300025326-Ga0209342_1000012793

Quality

80.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 363-407
PDB
D2 medium residues 16-357
PDB
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1piiA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.74 42.0 5.63e-01 94.4% 100.0%
1iq8A01 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.74 58.0 5.73e-01 79.8% 88.2%
1tqxA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 46.0 5.62e-01 96.2% 98.2%
1wx0A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 44.0 5.48e-01 96.8% 97.2%
2oktA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.70 43.0 5.49e-01 97.4% 100.0%
3thaB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 49.0 5.66e-01 95.9% 96.4%
5tcgA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 47.0 5.52e-01 96.8% 93.6%
2ekcB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 48.0 5.56e-01 96.8% 94.9%
1geqB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 48.0 5.62e-01 95.6% 98.8%
1nvmA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 49.0 5.51e-01 97.1% 93.3%
3fndA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.67 50.0 5.60e-01 96.2% 95.9%
1onwA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.67 48.0 5.37e-01 96.5% 91.7%
5k9xA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 48.0 5.46e-01 97.1% 94.6%
2agkA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 45.0 5.43e-01 95.6% 99.6%
4f3hA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.66 44.0 5.10e-01 86.8% 91.1%
1s2uB00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.66 44.0 4.80e-01 92.7% 78.9%
3mu7A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 51.0 5.70e-01 98.0% 100.0%
1telA02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.65 50.0 5.44e-01 98.2% 94.0%
1yirA00 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.65 37.0 3.59e-01 93.9% 48.5%
3kzpA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.65 44.0 5.26e-01 87.1% 99.1%
6n2aB02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.64 41.0 4.97e-01 91.5% 94.0%
4ogzA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 51.0 5.49e-01 95.9% 95.5%
4mozD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 50.0 5.25e-01 98.0% 87.2%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.64 48.0 4.86e-01 96.2% 76.2%
1gehA02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.63 50.0 5.37e-01 98.5% 94.3%
3ebvA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 51.0 5.53e-01 96.2% 98.6%
4s3jB02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 43.0 4.81e-01 89.5% 87.9%
3cuxA01 3.20.20.360 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Malate synthase, domain 3 0.62 49.0 4.75e-01 95.9% 73.2%
3r89A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 43.0 4.62e-01 95.3% 82.0%
3lteD00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 21.0 3.59e-01 88.3% 86.2%
4eacC01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.61 41.0 4.70e-01 89.2% 88.2%
4nnaA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 54.0 5.48e-01 97.1% 94.6%
7pd2B01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.60 45.0 4.49e-01 97.4% 73.1%
3sy8C02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.60 40.0 4.59e-01 96.2% 90.1%
3nurA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.59 48.0 5.10e-01 96.2% 93.8%
2q02A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.59 46.0 5.15e-01 98.0% 100.0%
2vtfA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.59 49.0 4.94e-01 98.5% 84.2%
3n2oA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.59 45.0 4.95e-01 93.9% 94.0%
3dz1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 48.0 5.15e-01 98.8% 96.3%
3qvqA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.58 39.0 4.53e-01 95.3% 91.2%
1uumA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 48.0 4.76e-01 97.1% 83.1%
4xc7B01 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.58 24.0 3.62e-01 81.0% 88.2%
4hh3C02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.57 24.0 3.78e-01 82.2% 98.5%
1dbqA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 23.0 3.64e-01 83.6% 93.3%
2hvwA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.57 26.0 3.95e-01 98.5% 100.0%
3cgbA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 22.0 3.28e-01 87.4% 78.5%
1kfwA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 51.0 5.03e-01 96.8% 95.4%
2qr6A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 50.0 4.96e-01 98.0% 91.4%
3kp1A04 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.55 24.0 3.64e-01 90.4% 92.7%
2g95B02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 38.0 4.33e-01 96.8% 92.9%
1wlsA02 3.40.50.40 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 22.0 3.56e-01 79.2% 96.9%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.53 30.0 3.66e-01 90.4% 81.4%
1o7dA01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.53 42.0 4.65e-01 97.1% 100.0%
6hxqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 22.0 3.41e-01 82.5% 94.6%
1kblA04 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.52 48.0 4.89e-01 97.1% 99.7%
6m9uB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 32.0 3.64e-01 82.5% 80.4%
4bq2D02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 45.0 3.82e-01 90.6% 93.4%
3hpaA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 43.0 4.52e-01 98.5% 96.8%
2fukA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 29.0 3.50e-01 94.2% 83.9%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995745 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.83 65.0 6.75e-01 80.1% 94.2%
4508759 2002.1.1.28 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.74 46.0 5.66e-01 96.5% 95.4%
5045696 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.72 53.0 5.65e-01 75.1% 94.8%
3198155 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.71 38.0 5.10e-01 89.5% 94.2%
4502867 2002.1.1.97 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI 0.71 47.0 5.48e-01 96.5% 91.8%
4990134 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.71 46.0 5.12e-01 96.2% 81.1%
3978333 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.70 47.0 5.19e-01 96.2% 82.2%
428368 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.70 49.0 5.66e-01 95.9% 96.4%
4149089 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 49.0 5.78e-01 96.8% 99.2%
4990088 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 48.0 5.65e-01 96.8% 97.5%
4189701 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 49.0 5.65e-01 96.8% 95.7%
4934769 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 49.0 5.64e-01 96.2% 95.7%
4051750 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.69 48.0 5.55e-01 95.6% 94.5%
None 0.69 50.0 5.55e-01 97.1% 92.2%
3257930 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.68 48.0 5.46e-01 96.2% 91.3%
4318438 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.68 50.0 5.52e-01 96.8% 91.3%
3385711 2002.1.1.28 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.68 41.0 5.24e-01 95.6% 100.0%
4211024 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.68 48.0 5.52e-01 96.5% 95.3%
139718 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.68 48.0 5.54e-01 96.8% 94.3%
5025353 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.67 43.0 5.35e-01 94.7% 100.0%
None 0.67 49.0 5.45e-01 96.8% 91.0%
4180062 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.67 49.0 5.54e-01 98.0% 96.2%
None 0.67 49.0 5.51e-01 96.5% 94.7%
4523804 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.67 49.0 5.54e-01 97.1% 95.1%
4556948 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.67 47.0 5.41e-01 95.3% 95.6%
3602729 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.66 49.0 5.45e-01 96.5% 91.8%
4664632 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.66 48.0 5.51e-01 97.1% 97.6%
None 0.66 49.0 5.52e-01 96.5% 96.2%
None 0.66 48.0 5.40e-01 96.8% 93.0%
3643243 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.66 48.0 5.35e-01 96.5% 90.4%
3620472 2002.1.1.101 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Orn_Arg_deC_N 0.66 44.0 5.23e-01 93.3% 95.0%
4016387 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.66 49.0 5.16e-01 98.5% 82.9%
4958699 2002.1.1.56 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus 0.66 48.0 4.68e-01 96.5% 67.6%
None 0.65 49.0 5.41e-01 97.4% 92.8%
4060506 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.65 47.0 5.38e-01 96.2% 95.4%
4152729 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.65 49.0 5.39e-01 97.4% 92.8%
4146766 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.64 49.0 5.32e-01 98.5% 92.6%
4088626 2002.1.1.15 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.64 48.0 5.43e-01 95.9% 99.6%
4629816 2002.1.1.25 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.62 50.0 5.37e-01 99.4% 96.2%
4411670 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 50.0 4.85e-01 100.0% 75.0%
4460580 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.61 46.0 5.20e-01 95.9% 98.1%
3985074 2002.1.1.50 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › F_bP_aldolase 0.60 46.0 5.02e-01 96.5% 93.3%
3590567 2002.1.1.50 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › F_bP_aldolase 0.60 46.0 4.99e-01 96.5% 92.6%
None 0.59 47.0 5.02e-01 99.7% 94.2%
2389924 2002.1.1.104 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_2_C 0.58 49.0 4.98e-01 95.9% 87.5%
4928094 2002.1.1.8 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase 0.57 49.0 4.95e-01 90.4% 90.1%
4368836 2002.1.1.13 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.56 49.0 4.63e-01 90.1% 94.2%
5047328 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.56 51.0 5.25e-01 95.6% 100.0%
3200621 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.56 48.0 4.75e-01 90.1% 90.4%
4926841 2002.1.1.25 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.56 46.0 4.93e-01 99.4% 97.7%
2530276 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.55 49.0 5.12e-01 96.5% 98.1%
4284440 2002.1.1.234 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2+Meth_synt_1 0.55 51.0 4.97e-01 96.2% 97.5%
4034477 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.54 30.0 3.76e-01 82.2% 87.5%
3931420 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.54 34.0 3.91e-01 90.9% 83.6%
5016073 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.53 30.0 3.85e-01 88.6% 94.7%
4939592 2007.1.14.34 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › DUF2117 0.53 24.0 3.50e-01 82.5% 95.2%
3846270 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.52 31.0 3.72e-01 91.2% 87.9%
3748761 2002.3.1.1 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_38N 0.52 42.0 4.25e-01 97.4% 82.0%
5023089 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.51 28.0 3.63e-01 96.2% 93.2%
2673968 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.51 44.0 3.77e-01 90.4% 92.5%
5046299 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.50 35.0 3.83e-01 70.5% 96.2%
3509905 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.50 39.0 4.22e-01 95.3% 96.1%