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IMGVR_UViG_3300025326_000238-3300025326-Ga0209342_1000228238

Arc-Vir

IMGVR_UViG_3300025326_000238-3300025326-Ga0209342_1000228238

Identity

Kingdom:
archaea

Quality

82.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-141
PDB
Domain cluster: rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00088__D33-109
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qgpA00 1.10.30.50 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › 0.69 52.0 5.44e-01 93.4% 85.5%
3o2iA00 3.30.70.2710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 37.0 3.76e-01 82.4% 66.7%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4999440 378.1.1.27 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 0.82 57.0 5.97e-01 84.6% 77.6%
5070853 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.81 61.0 6.31e-01 90.1% 83.5%
3286852 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.78 61.0 5.90e-01 82.4% 74.0%
4943720 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.75 54.0 4.81e-01 84.6% 54.4%
4989310 378.1.1.27 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 0.73 48.0 3.68e-01 79.1% 31.7%
3587782 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.71 55.0 5.11e-01 98.9% 66.4%
4370946 378.1.1.10 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.71 57.0 4.56e-01 85.7% 45.3%
2991844 378.1.1.10 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.70 57.0 5.31e-01 90.1% 71.6%
3317146 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.70 64.0 5.75e-01 100.0% 74.2%
4986026 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.70 48.0 3.72e-01 81.3% 34.6%
185780 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.69 52.0 5.15e-01 100.0% 74.2%
2550470 378.1.1.10 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.66 55.0 4.45e-01 89.0% 51.2%
5080395 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.65 55.0 5.09e-01 92.3% 88.7%
3307439 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.63 58.0 5.25e-01 100.0% 78.7%
2449258 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.62 48.0 3.96e-01 83.5% 49.4%
3080542 4232.1.1.1 ↗ few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 0.58 41.0 4.17e-01 73.6% 92.3%
5014976 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.50 36.0 2.63e-01 97.8% 24.1%
3592053 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.50 35.0 2.73e-01 72.5% 97.1%