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IMGVR_UViG_3300025326_001890-3300025326-Ga0209342_1001044413
Arc-VirIMGVR_UViG_3300025326_001890-3300025326-Ga0209342_1001044413
Identity
- Kingdom:
- archaea
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-104
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hczX02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.64 | 39.0 | 3.97e-01 | 98.1% | 60.6% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 37.0 | 4.47e-01 | 97.1% | 90.8% |
| 2dhgA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 38.0 | 4.28e-01 | 90.3% | 82.3% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 47.0 | 4.55e-01 | 99.0% | 74.6% |
| 8hi1E01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 36.0 | 3.84e-01 | 97.1% | 70.1% |
| 4r8tB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 35.0 | 4.01e-01 | 89.3% | 84.9% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 33.0 | 3.84e-01 | 76.7% | 84.5% |
| 2cqpA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 37.0 | 3.85e-01 | 96.1% | 72.4% |
| 1x5oA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 37.0 | 3.97e-01 | 90.3% | 82.6% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.54 | 47.0 | 4.82e-01 | 99.0% | 100.0% |
| 3hrzC01 | 2.20.210.20 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.54 | 28.0 | 3.55e-01 | 80.6% | 98.0% |
| 3smzA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 35.0 | 3.63e-01 | 93.2% | 69.1% |
| 1kv3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.94e-01 | 96.1% | 73.0% |
| 4dzdA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.52 | 38.0 | 3.64e-01 | 93.2% | 65.9% |
| 1si5H01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 40.0 | 3.86e-01 | 93.2% | 73.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3881059 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 41.0 | 4.78e-01 | 99.0% | 82.7% |
| 4889788 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 59.0 | 6.07e-01 | 100.0% | 95.9% |
| 3742610 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 40.0 | 4.23e-01 | 94.2% | 74.4% |
| 4946301 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 40.0 | 4.09e-01 | 100.0% | 71.0% |
| 3919016 | 11.1.1.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_N | 0.55 | 46.0 | 4.11e-01 | 97.1% | 64.1% |
| 3660511 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 35.0 | 3.50e-01 | 96.1% | 62.9% |
| 4028096 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 34.0 | 3.42e-01 | 90.3% | 60.0% |
| 4026274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 30.0 | 2.78e-01 | 77.7% | 41.4% |
| 3263254 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.52 | 41.0 | 3.88e-01 | 98.1% | 70.4% |
| 3560235 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.50 | 40.0 | 2.56e-01 | 84.5% | 17.6% |
| 3714094 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.50 | 38.0 | 3.81e-01 | 97.1% | 76.4% |
| 3273446 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 38.0 | 3.75e-01 | 99.0% | 75.5% |