Back to structures

IMGVR_UViG_3300025333_000004-3300025333-Ga0208137_1003618

Arc-Vir

IMGVR_UViG_3300025333_000004-3300025333-Ga0208137_1003618

Quality

82.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-120
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14551.12 best MCM_N 36.4 8.30e-09 78.3% 57.9%
D2 high residues 125-250
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17207.10 best MCM_OB 61.2 1.20e-16 87.3% 82.5%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pofA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.89 53.0 5.87e-01 100.0% 73.1%
2vl6A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.86 58.0 6.15e-01 100.0% 76.8%
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 45.0 5.31e-01 100.0% 81.1%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 44.0 5.21e-01 100.0% 83.5%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 45.0 5.31e-01 100.0% 85.7%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 47.0 5.16e-01 100.0% 78.6%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 46.0 5.20e-01 100.0% 80.8%
3ulpD00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 49.0 5.17e-01 100.0% 78.8%
2r61A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 34.0 4.32e-01 100.0% 82.2%
1enfA01 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 32.0 4.04e-01 100.0% 83.3%
3mc0B02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 33.0 4.00e-01 100.0% 79.8%
2mamA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 3.82e-01 81.7% 76.3%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4966537 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.94 91.0 8.21e-01 100.0% 81.2%
2988967 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.90 86.0 7.78e-01 100.0% 83.2%
5030363 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.89 54.0 5.85e-01 100.0% 70.9%
5013993 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.88 55.0 5.90e-01 100.0% 72.7%
3255514 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.87 82.0 7.31e-01 100.0% 79.4%
3617977 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.87 57.0 5.81e-01 100.0% 68.0%
5011190 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.86 53.0 5.52e-01 100.0% 65.8%
4982792 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.86 81.0 7.42e-01 100.0% 82.5%
3481495 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.86 81.0 7.22e-01 100.0% 80.0%
1736300 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.85 80.0 7.23e-01 100.0% 82.3%
5023132 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.85 55.0 5.86e-01 100.0% 74.5%
5000768 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.85 54.0 5.72e-01 100.0% 71.3%
3488538 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.85 51.0 5.11e-01 100.0% 59.2%
4029582 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.84 57.0 5.95e-01 100.0% 74.8%
3650641 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.84 55.0 5.39e-01 100.0% 62.2%
3788866 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.83 54.0 5.19e-01 100.0% 59.3%
3594029 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.83 50.0 5.50e-01 100.0% 73.3%
3798423 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 57.0 5.62e-01 100.0% 67.7%
3555125 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.82 59.0 5.83e-01 100.0% 70.8%
4309330 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.81 53.0 5.53e-01 100.0% 72.2%
3273881 375.1.1.58 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB 0.78 39.0 5.52e-01 85.7% 96.9%
3707381 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 49.0 4.94e-01 100.0% 64.0%
3830448 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.77 55.0 5.23e-01 100.0% 64.1%
3711252 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.77 54.0 5.20e-01 100.0% 65.0%
3547167 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 69.0 6.24e-01 100.0% 80.6%
381191 2.1.1.122 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.73 47.0 5.16e-01 100.0% 78.6%
3616890 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.73 49.0 5.19e-01 100.0% 75.7%
3365669 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.72 48.0 5.14e-01 100.0% 77.3%
3473720 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.72 48.0 5.10e-01 100.0% 77.3%
3448049 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.70 46.0 5.03e-01 100.0% 79.0%
3712376 2.1.1.225 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 0.69 47.0 4.83e-01 100.0% 72.5%
3785641 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 39.0 4.82e-01 100.0% 92.0%
4220178 2.1.1.228 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_bind 0.65 59.0 4.82e-01 100.0% 64.7%
3777997 2004.1.1.296 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_bind 0.64 58.0 4.79e-01 100.0% 69.1%
3739772 2.1.1.228 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_bind 0.64 53.0 4.55e-01 100.0% 56.4%
3918508 148.1.3.213 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_bind 0.63 57.0 4.71e-01 100.0% 67.1%
3253622 148.1.3.213 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_bind 0.61 55.0 4.61e-01 100.0% 63.6%
3633377 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.61 53.0 4.69e-01 100.0% 66.5%
3197159 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 53.0 3.51e-01 100.0% 26.3%
3965166 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 36.0 4.12e-01 100.0% 88.9%
4030549 2.1.1.228 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_bind 0.56 50.0 4.40e-01 100.0% 68.9%
3677650 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 50.0 3.65e-01 100.0% 37.5%
D3 high residues 628-703
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21120.4 best WHD_MCM_arc 27.9 2.80e-06 84.2% 100.0%
D4 medium residues 251-267_323-479
PDB
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF00493.30 best MCM 202.5 6.90e-60 97.1% 70.1%
PF07728.21 AAA_5 37.3 3.70e-09 81.0% 89.9%
PF00004.36 AAA 25.9 1.70e-05 67.2% 55.7%
PF01078.28 Mg_chelatase 22.7 8.00e-05 64.4% 31.9%
D5 medium residues 268-322_480-538
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 33.0 4.85e-01 100.0% 93.6%
3tahA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 37.0 4.12e-01 95.6% 94.3%
1i51B00 3.30.70.1470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Caspase-like 0.50 26.0 2.88e-01 99.1% 58.7%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3583408 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.87 66.0 5.22e-01 77.2% 94.6%
5003899 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.85 82.0 5.89e-01 100.0% 96.4%
5025359 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.85 82.0 5.87e-01 99.1% 97.5%
3550992 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.82 78.0 5.72e-01 100.0% 95.8%
4948018 2004.1.1.820 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_lid 0.80 59.0 4.54e-01 76.3% 97.0%
None 0.78 75.0 5.42e-01 100.0% 97.1%
3695173 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.77 73.0 5.17e-01 100.0% 84.0%
5016962 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.70 66.0 4.94e-01 98.2% 95.6%
4030223 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.69 64.0 4.76e-01 100.0% 97.4%
4994067 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.51 31.0 3.27e-01 95.6% 67.0%
5057879 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.51 31.0 3.10e-01 94.7% 57.5%
D6 medium residues 539-626
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17855.8 best MCM_lid 64.4 1.60e-17 84.1% 78.2%
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4r7zA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.95 72.0 4.70e-01 89.8% 21.8%
2l09A01 1.10.8.550 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B 0.90 52.0 6.79e-01 80.7% 100.0%
3f8tA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.87 74.0 4.95e-01 88.6% 28.0%
4zpxA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.81 57.0 5.68e-01 79.5% 69.6%
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.81 59.0 6.07e-01 98.9% 79.5%
4a3vB01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.80 51.0 5.60e-01 80.7% 79.2%
2c9oB03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.79 57.0 5.92e-01 98.9% 79.5%
5ubvA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.79 51.0 5.62e-01 81.8% 81.7%
2dznF00 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.79 50.0 5.60e-01 80.7% 82.6%
1g8pA02 1.10.8.80 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain 0.77 57.0 6.06e-01 94.3% 87.2%
3whkA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.77 49.0 5.41e-01 80.7% 79.2%
2kruA01 1.10.8.550 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B 0.77 45.0 5.67e-01 79.5% 100.0%
1f1eA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.75 67.0 5.47e-01 95.5% 89.4%
1fnnA01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.73 57.0 5.44e-01 81.8% 100.0%
1w5sA01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.72 54.0 5.49e-01 79.5% 100.0%
2r44A03 1.10.8.80 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain 0.70 62.0 5.57e-01 95.5% 83.9%
2hqcA01 1.20.1640.10 Mainly Alpha › Up-down Bundle › Multidrug efflux transporter AcrB transmembrane fold › Multidrug efflux transporter AcrB transmembrane domain 0.70 57.0 4.36e-01 88.6% 49.0%
2qbyA01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.68 56.0 5.34e-01 87.5% 97.1%
2m6uA00 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.67 54.0 5.61e-01 87.5% 98.8%
1te2A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.66 40.0 4.29e-01 87.5% 72.2%
2aplA01 1.10.8.330 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like 0.65 48.0 5.30e-01 81.8% 100.0%
4irfB00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.64 55.0 4.61e-01 92.0% 84.7%
2p0tA02 1.10.60.30 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains 0.64 40.0 4.34e-01 87.5% 76.4%
2k77A00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.62 54.0 4.58e-01 95.5% 86.2%
2k3qA00 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.62 50.0 4.56e-01 88.6% 71.2%
4i9oA00 1.10.246.20 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain 0.62 50.0 5.22e-01 88.6% 100.0%
2ly8A00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.61 54.0 4.90e-01 98.9% 81.8%
1xfiA02 1.20.1700.10 Mainly Alpha › Up-down Bundle › AF1104-like › AF1104-like 0.60 49.0 4.95e-01 90.9% 91.1%
6zhiB02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.60 48.0 4.95e-01 94.3% 94.0%
2y1eA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.59 46.0 4.68e-01 84.1% 87.4%
1jvmB00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 40.0 3.87e-01 90.9% 61.0%
3a1sA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 35.0 3.53e-01 89.8% 58.0%
4fgmA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.58 51.0 3.67e-01 100.0% 86.5%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 44.0 4.51e-01 92.0% 86.7%
5y27A00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.57 41.0 3.99e-01 73.9% 70.4%
3solA00 1.20.58.1630 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS 0.56 42.0 4.22e-01 79.5% 98.9%
3kk4A01 1.10.3990.20 Mainly Alpha › Orthogonal Bundle › Ribbon-helix-helix fold › protein bp1543 0.56 40.0 3.76e-01 87.5% 60.6%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 43.0 4.04e-01 83.0% 90.9%
2kr6A01 1.10.472.100 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Presenilin 0.56 40.0 3.83e-01 78.4% 63.2%
3bhgA01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.55 45.0 4.21e-01 93.2% 81.7%
3deeA01 1.10.150.690 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 0.54 44.0 4.51e-01 94.3% 94.2%
3czpB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 43.0 3.35e-01 89.8% 78.4%
1vgpA02 1.10.230.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 0.54 36.0 3.52e-01 88.6% 59.6%
3cmnA01 1.20.150.30 Mainly Alpha › Up-down Bundle › Lysin › Zincin-like metallopeptidase, N-terminal domain 0.54 41.0 3.86e-01 86.4% 92.3%
1q9cA01 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.53 44.0 3.80e-01 94.3% 90.5%
3buxB01 1.20.930.20 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain 0.53 44.0 3.99e-01 96.6% 85.3%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.52 39.0 3.57e-01 95.5% 58.4%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 36.0 3.10e-01 72.7% 83.2%
3hlzA02 1.20.120.1090 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 41.0 3.67e-01 88.6% 89.9%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3701122 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.94 73.0 8.15e-01 84.1% 100.0%
3416632 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.94 78.0 7.13e-01 87.5% 69.1%
5060040 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.93 77.0 7.00e-01 89.8% 68.2%
3470194 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.93 72.0 6.72e-01 85.2% 67.6%
4025426 148.1.3.213 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_bind 0.92 66.0 7.67e-01 83.0% 100.0%
3703101 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.92 78.0 7.79e-01 87.5% 85.6%
3585782 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.91 77.0 7.33e-01 98.9% 77.0%
3557669 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.91 78.0 6.99e-01 88.6% 67.8%
3711269 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.91 78.0 7.10e-01 88.6% 85.5%
5029473 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.91 81.0 7.49e-01 92.0% 78.1%
3491080 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.91 80.0 6.62e-01 100.0% 56.6%
3475867 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.90 73.0 7.89e-01 88.6% 98.7%
3396348 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.90 77.0 7.02e-01 94.3% 70.9%
4020585 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.90 74.0 7.19e-01 85.2% 85.3%
None 0.90 76.0 4.89e-01 88.6% 22.3%
4237904 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.90 73.0 6.20e-01 93.2% 55.6%
3817287 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.89 75.0 7.42e-01 92.0% 84.4%
3068146 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.89 72.0 7.08e-01 92.0% 78.7%
4790043 2004.1.1.820 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM_lid 0.89 75.0 6.51e-01 87.5% 63.2%
3718449 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.89 79.0 7.34e-01 98.9% 77.1%
3476276 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.88 76.0 7.53e-01 88.6% 98.9%
3600430 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.88 79.0 6.70e-01 94.3% 61.5%
4667812 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.88 77.0 6.89e-01 97.7% 69.6%
3583412 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.88 76.0 6.81e-01 89.8% 73.0%
None 0.88 78.0 4.71e-01 98.9% 16.7%
3877792 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.88 76.0 7.99e-01 100.0% 98.8%
4948020 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.88 75.0 7.27e-01 97.7% 82.1%
3547168 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.88 78.0 6.60e-01 94.3% 60.7%
3703312 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.88 79.0 4.95e-01 100.0% 21.0%
5016180 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.88 80.0 7.94e-01 96.6% 92.2%
4027418 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.88 76.0 6.79e-01 92.0% 68.7%
None 0.88 74.0 4.70e-01 87.5% 21.4%
None 0.87 75.0 4.59e-01 92.0% 17.4%
1628548 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.87 74.0 7.06e-01 88.6% 81.8%
3677397 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 76.0 4.55e-01 92.0% 15.9%
2869033 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.87 74.0 7.15e-01 97.7% 80.6%
3603531 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.86 71.0 7.49e-01 97.7% 95.0%
3819132 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.86 78.0 7.62e-01 95.5% 91.6%
3622337 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.86 75.0 7.16e-01 92.0% 80.0%
5026918 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.86 78.0 7.45e-01 100.0% 84.0%
5012901 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.86 71.0 6.80e-01 98.9% 77.0%
3744257 2.1.1.228 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_bind 0.86 60.0 6.32e-01 84.1% 80.0%
4024278 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.86 78.0 7.58e-01 95.5% 88.4%
4040236 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.86 74.0 7.79e-01 97.7% 100.0%
2869044 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.85 76.0 7.71e-01 98.9% 94.3%
3557533 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.85 75.0 7.48e-01 95.5% 90.0%
3621511 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.85 77.0 6.34e-01 95.5% 60.0%
2627484 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.85 71.0 7.27e-01 100.0% 89.5%
3169090 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.85 76.0 6.08e-01 95.5% 54.4%
3064129 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.84 70.0 7.33e-01 89.8% 95.1%
3064123 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.84 65.0 7.15e-01 85.2% 100.0%
4030181 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.84 75.0 5.87e-01 94.3% 54.1%
3573601 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.84 67.0 6.24e-01 83.0% 69.5%
5013995 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.83 73.0 7.43e-01 97.7% 95.3%
3593739 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.83 74.0 6.50e-01 95.5% 68.8%
3604441 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.83 75.0 5.84e-01 95.5% 49.4%
4947854 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.83 70.0 6.81e-01 88.6% 84.2%
3059782 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 73.0 6.19e-01 98.9% 61.0%
None 0.81 77.0 4.88e-01 100.0% 26.0%
3268763 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.81 77.0 7.05e-01 100.0% 98.2%
5044338 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.81 67.0 6.27e-01 87.5% 76.2%
4024847 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.80 76.0 7.54e-01 100.0% 97.8%
4976628 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.80 58.0 5.82e-01 81.8% 73.3%
4939813 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.80 65.0 5.33e-01 100.0% 50.0%
5044337 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.80 63.0 6.11e-01 87.5% 75.8%
4952132 148.1.3.29 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › LonB_AAA-LID 0.80 59.0 5.84e-01 83.0% 74.4%
3605789 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.78 56.0 5.82e-01 97.7% 79.5%
4959600 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 65.0 6.67e-01 88.6% 90.6%
3972607 148.1.3.29 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › LonB_AAA-LID 0.78 57.0 5.72e-01 83.0% 74.4%
5026333 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 65.0 5.86e-01 89.8% 67.0%
4934144 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 65.0 6.82e-01 94.3% 98.8%
4981595 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 66.0 6.29e-01 89.8% 88.0%
3962695 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 64.0 4.37e-01 100.0% 27.4%
3608227 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 62.0 6.55e-01 87.5% 98.8%
3596205 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 63.0 6.21e-01 89.8% 83.2%
4945383 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 62.0 5.87e-01 100.0% 74.3%
4997798 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.75 64.0 5.91e-01 100.0% 72.7%
4665138 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 65.0 5.88e-01 98.9% 70.4%
4947246 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 62.0 5.83e-01 100.0% 74.3%
3724404 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.74 66.0 5.78e-01 95.5% 84.8%
4969623 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 64.0 4.87e-01 95.5% 45.4%
3588988 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.73 63.0 6.19e-01 93.2% 92.6%
5024099 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.73 64.0 5.54e-01 94.3% 68.5%
4943615 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.73 63.0 6.20e-01 94.3% 94.7%
3264031 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.72 64.0 5.89e-01 94.3% 81.8%
5039661 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 62.0 5.54e-01 94.3% 74.4%
5023502 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 57.0 5.47e-01 97.7% 74.0%
4983617 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.71 63.0 5.64e-01 95.5% 75.0%
4943746 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.71 61.0 6.01e-01 94.3% 94.7%
4045754 110.1.1.18 alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death_Lrrd1 0.59 49.0 4.64e-01 90.9% 89.5%
5047712 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.55 42.0 4.50e-01 90.9% 100.0%
5079638 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.54 45.0 4.37e-01 95.5% 89.0%