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IMGVR_UViG_3300025344_000067-3300025344-Ga0208772_10015513

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300025344_000067-3300025344-Ga0208772_10015513 ↗
Kingdom:: archaea

Quality

76.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-62

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2x4hA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.61	46.0	3.58e-01	80.3%	58.9%
3hruB01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	39.0	3.04e-01	72.1%	56.8%

ECOD (21)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4942882	4156.1.1.6 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc	0.70	50.0	3.62e-01	75.4%	94.1%
4283969	101.1.2.19 ↗	alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac	0.63	43.0	2.94e-01	70.5%	42.6%
4992111	101.1.2.21 ↗	alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress	0.63	45.0	3.34e-01	73.8%	54.1%
4200603	2003.1.5.3 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2	0.63	54.0	3.50e-01	96.7%	57.4%
3180020	101.1.2.19 ↗	alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac	0.62	43.0	2.99e-01	70.5%	47.0%
3718788	138.1.1.0 ↗	alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain	0.62	36.0	2.90e-01	70.5%	28.0%
4944605	4156.1.1.0 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like	0.57	45.0	3.04e-01	85.2%	25.1%
4344487	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.56	46.0	3.47e-01	96.7%	46.1%
4466102	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.55	46.0	3.41e-01	96.7%	44.7%
4646072	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.55	45.0	3.37e-01	96.7%	44.7%
5042462	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.54	44.0	3.35e-01	96.7%	46.1%
4507638	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.54	43.0	3.34e-01	96.7%	46.1%
4478999	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.53	42.0	3.24e-01	95.1%	60.1%
4645846	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.53	44.0	3.30e-01	96.7%	45.3%
5080684	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.53	40.0	3.19e-01	91.8%	56.8%
4241167	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.52	43.0	3.26e-01	98.4%	54.7%
4930596	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.52	41.0	3.16e-01	95.1%	52.9%
4527101	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.51	42.0	3.22e-01	96.7%	48.1%
4985036	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.51	41.0	3.13e-01	98.4%	48.8%
5052491	101.1.2.31 ↗	alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha	0.50	42.0	3.07e-01	98.4%	47.9%
5082704	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.50	42.0	3.06e-01	100.0%	71.3%