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IMGVR_UViG_3300025351_000025-3300025351-Ga0208135_1016683
Arc-VirIMGVR_UViG_3300025351_000025-3300025351-Ga0208135_1016683
Identity
- Kingdom:
- archaea
Quality
71.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-60
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k59A06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.78 | 56.0 | 5.79e-01 | 76.9% | 85.1% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.73 | 59.0 | 5.27e-01 | 90.4% | 63.5% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.72 | 57.0 | 5.77e-01 | 94.2% | 90.2% |
| 1yzmA00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.70 | 55.0 | 5.78e-01 | 92.3% | 100.0% |
| 1dd3A01 | 1.20.5.710 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.67 | 50.0 | 4.85e-01 | 84.6% | 71.9% |
| 1z8sA02 | 6.10.140.360 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 46.0 | 4.92e-01 | 84.6% | 100.0% |
| 3hb0D00 | 3.40.50.12350 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 53.0 | 3.39e-01 | 94.2% | 74.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4883518 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.77 | 60.0 | 5.55e-01 | 86.5% | 69.1% |
| 3441654 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.73 | 53.0 | 3.19e-01 | 82.7% | 11.5% |
| 3474506 | 109.4.1.1765 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF31007 | 0.65 | 56.0 | 3.41e-01 | 100.0% | 33.3% |
| 4466948 | 5060.1.1.2 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › DUF2764 | 0.64 | 53.0 | 3.88e-01 | 100.0% | 36.3% |
| 3610857 | 4309.1.1.0 ↗ | a+b complex topology › DUSP, domain in ubiquitin-specific proteases › DUSP, domain in ubiquitin-specific proteases › DUSP, domain in ubiquitin-specific proteases | 0.61 | 50.0 | 3.71e-01 | 100.0% | 54.4% |